Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328F01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 137 4e-33
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 137 4e-33
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 109 2e-24
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 108 3e-24
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 101 3e-22
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 79 2e-15
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 76 2e-14
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 75 3e-14
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 73 2e-13
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 57 9e-09
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 56 2e-08
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 56 2e-08
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 56 2e-08
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 51 4e-07
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 49 2e-06
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 49 2e-06
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 49 2e-06
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 46 2e-05
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 46 2e-05
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 37 0.010
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 34 0.071
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 33 0.16
U49941-1|AAB53872.1| 609|Caenorhabditis elegans Hypothetical pr... 32 0.22
AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid deplet... 29 2.0
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 29 2.7
Z99171-5|CAB16311.1| 280|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical pr... 27 8.1
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF038608-14|AAT92087.1| 314|Caenorhabditis elegans Serpentine r... 27 8.1
AF022985-14|AAB69975.2| 218|Caenorhabditis elegans Hypothetical... 27 8.1
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 137 bits (332), Expect = 4e-33
Identities = 65/100 (65%), Positives = 83/100 (83%)
Frame = +1
Query: 160 NIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISL 339
+IRN+C+VAHVDHGKT+ ADSL+S+N +IS RM+GKLRYMDSR DEQ RGITMKSS ISL
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISL 78
Query: 340 YHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
E L+NLIDSPGH+DFS EV++A++L D A++++
Sbjct: 79 L----CEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 137 bits (332), Expect = 4e-33
Identities = 65/100 (65%), Positives = 83/100 (83%)
Frame = +1
Query: 160 NIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISL 339
+IRN+C+VAHVDHGKT+ ADSL+S+N +IS RM+GKLRYMDSR DEQ RGITMKSS ISL
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISL 78
Query: 340 YHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
E L+NLIDSPGH+DFS EV++A++L D A++++
Sbjct: 79 L----CEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 109 bits (261), Expect = 2e-24
Identities = 58/130 (44%), Positives = 85/130 (65%), Gaps = 24/130 (18%)
Frame = +1
Query: 142 LQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMK 321
L + NIRN+ ++AHVDHGK+TL DSL+S GII+ +G+ R+ D+R DEQ+R IT+K
Sbjct: 12 LMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIK 71
Query: 322 SSSISLYHAMNQEE------------------------YLVNLIDSPGHIDFSSEVSTAV 429
S++ISL+ + +++ +L+NLIDSPGH+DFSSEV+ A+
Sbjct: 72 STAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAAL 131
Query: 430 MLCDGAIVVV 459
+ DGA+VVV
Sbjct: 132 RVTDGALVVV 141
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 108 bits (259), Expect = 3e-24
Identities = 58/130 (44%), Positives = 85/130 (65%), Gaps = 24/130 (18%)
Frame = +1
Query: 142 LQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMK 321
L + NIRN+ ++AHVDHGK+TL DSL+S GII+ +G+ R+ D+R DEQ+R IT+K
Sbjct: 12 LMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIK 71
Query: 322 SSSISLYHAMNQEE------------------------YLVNLIDSPGHIDFSSEVSTAV 429
S++ISL+ + +++ +L+NLIDSPGH+DFSSEV+ A+
Sbjct: 72 STAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAAL 131
Query: 430 MLCDGAIVVV 459
+ DGA+VVV
Sbjct: 132 GVTDGALVVV 141
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 101 bits (242), Expect = 3e-22
Identities = 53/117 (45%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
Frame = +1
Query: 121 DSKKLLELQN-NPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDE 297
D KL+ L P IRN IVAHVDHGK+TLAD L+ G + G+ + +D E
Sbjct: 27 DPTKLVNLSEFTPDKIRNFGIVAHVDHGKSTLADRLLEMCGAVPP---GQKQMLDKLQVE 83
Query: 298 QQRGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVVCMN 468
++RGIT+K+ + +L H YL+NLID+PGH+DFS+EVS ++ +CDG +++V N
Sbjct: 84 RERGITVKAQTAALRH----RGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAAN 136
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 79.0 bits (186), Expect = 2e-15
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Frame = +1
Query: 67 IIRVKFICRIKSIKMRLVDSKKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGII 246
+ + KF + + + + L +L + P +RN+ I H+ HGKTT D L+
Sbjct: 100 VSKKKFQAAERFLPETVYKKEYLADLMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPE 159
Query: 247 SQRMS-GKLRYMDSRPDEQQRGITMKSSSISLY-HAMNQEEYLVNLIDSPGHIDFSSEVS 420
R R+ D E+QRG ++KS +S+ + YL+N+ID+PGH++FS E++
Sbjct: 160 FYRAEDADARFTDILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMT 219
Query: 421 TAVMLCDGAIVVVCMNSST--NDIHIIRH 501
+ L DG +V+V + N IRH
Sbjct: 220 ASYRLADGVVVMVDAHEGVMMNTERAIRH 248
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 75.8 bits (178), Expect = 2e-14
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Frame = +1
Query: 154 PSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMS-GKLRYMDSRPDEQQRGITMKSSS 330
P +RN+ I H+ HGKTT D L+ R R+ D E+QRG ++KS
Sbjct: 4 PHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQP 63
Query: 331 ISLY-HAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVVCMNSST--NDIHIIRH 501
+S+ + YL+N+ID+PGH++FS E++ + L DG +V+V + N IRH
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRH 123
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 74.9 bits (176), Expect = 3e-14
Identities = 41/106 (38%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Frame = +1
Query: 154 PSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPD----EQQRGITMK 321
PS +RNI ++AHVD GKTT+ + L+ G I ++G + ++ D E++RGIT++
Sbjct: 22 PSKLRNIGVIAHVDAGKTTVTERLLYLAGAI--HVAGHVDKGNTVTDFLDIERERGITVQ 79
Query: 322 SSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
S++++L + + + +NLID+PGH+DF EV V + DG +VV+
Sbjct: 80 SAAVNL----DWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVI 121
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Frame = +1
Query: 163 IRNICIVAHVDHGKTTLADSLISSNGIISQ--RMSGKLRY---MDSRPDEQQRGITMKSS 327
IRNI I AH+D GKTT+ + ++ G I + GK MD E+QRGIT++S+
Sbjct: 44 IRNIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGITIQSA 103
Query: 328 SISL-YHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVVC 462
+ + +H N +N+ID+PGH+DF+ EV A+ + DGA++V+C
Sbjct: 104 ATYVDWHGTN-----INIIDTPGHVDFTVEVERALRVLDGAVLVLC 144
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 56.8 bits (131), Expect = 9e-09
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +1
Query: 91 RIKSIKMRLVDSKKLLELQNNPSNIRN--ICIVAHVDHGKTTLADSLISSNGIISQRMSG 264
R++ IK+R+ K++ + + N+R+ IC++ HVD GKT + D++ +N + Q +G
Sbjct: 458 RMERIKLRIAKRKEVAQANRSTDNLRSPVICVLGHVDTGKTKMLDTIRRTN--VQQGEAG 515
Query: 265 KLRYMDSRPDEQQRGITMKSSSIS--LYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLC 438
+ + I + + L M +L+ ID+PGH FS+ + LC
Sbjct: 516 GITQQIGATEVPAEAIKERCRQVRGFLQDQMKIPGFLI--IDTPGHESFSNLRTRGSSLC 573
Query: 439 DGAIVVV 459
D AI+VV
Sbjct: 574 DFAILVV 580
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/97 (31%), Positives = 47/97 (48%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHA 348
N+ + HVDHGKTTL ++ K +D+ P+E+ RGIT+ + + A
Sbjct: 51 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLEYETA 110
Query: 349 MNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ ID PGH D+ + T +GAI+VV
Sbjct: 111 KRHYAH----IDCPGHADYIKNMITGAAQMEGAILVV 143
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/97 (31%), Positives = 47/97 (48%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHA 348
N+ + HVDHGKTTL ++ K +D+ P+E+ RGIT+ + + A
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLEYETA 111
Query: 349 MNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ ID PGH D+ + T +GAI+VV
Sbjct: 112 KRHYAH----IDCPGHADYIKNMITGAAQMEGAILVV 144
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/97 (31%), Positives = 47/97 (48%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHA 348
N+ + HVDHGKTTL ++ K +D+ P+E+ RGIT+ + + A
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLEYETA 111
Query: 349 MNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ ID PGH D+ + T +GAI+VV
Sbjct: 112 KRHYAH----IDCPGHADYIKNMITGAAQMEGAILVV 144
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 51.2 bits (117), Expect = 4e-07
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 15/115 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRM------------SGKLRY---MDSRPDEQQ 303
NI ++ HVD GK+T LI G I +R G +Y +D E++
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVVCMN 468
RGIT+ I+L+ +Y + +ID+PGH DF + T D A++VV N
Sbjct: 69 RGITI---DIALWK-FETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACN 119
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRY---------------MDSRPDEQQ 303
N+ +V HVD GK+TL L+ ++ R K ++ +D +E++
Sbjct: 172 NLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 231
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVVCMNSSTND 483
RG+TM S + + + L+D+PGH DF S + T D AI+VV N++T +
Sbjct: 232 RGVTMDIGRTSFETSHRR----IVLLDAPGHKDFISNMITGTSQADAAILVV--NATTGE 285
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRY---------------MDSRPDEQQ 303
N+ +V HVD GK+TL L+ ++ R K ++ +D +E++
Sbjct: 190 NLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 249
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVVCMNSSTND 483
RG+TM S + + + L+D+PGH DF S + T D AI+VV N++T +
Sbjct: 250 RGVTMDIGRTSFETSHRR----IVLLDAPGHKDFISNMITGTSQADAAILVV--NATTGE 303
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 49.2 bits (112), Expect = 2e-06
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRM------------SGKLRY---MDSRPDEQQ 303
NI ++ HVD GK+T LI G I +R G +Y +D E++
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
RGIT+ I+L+ +Y + +ID+PGH DF + T D A++VV
Sbjct: 69 RGITI---DIALWK-FETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 49.2 bits (112), Expect = 2e-06
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRM------------SGKLRY---MDSRPDEQQ 303
NI ++ HVD GK+T LI G I +R G +Y +D E++
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
RGIT+ I+L+ +Y + +ID+PGH DF + T D A++VV
Sbjct: 69 RGITI---DIALWK-FETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 49.2 bits (112), Expect = 2e-06
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRM------------SGKLRY---MDSRPDEQQ 303
NI ++ HVD GK+T LI G I +R G +Y +D E++
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
RGIT+ I+L+ +Y + +ID+PGH DF + T D A++VV
Sbjct: 69 RGITI---DIALWK-FETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/97 (26%), Positives = 44/97 (45%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHA 348
N+ + H+DHGKTTL ++ K +D +E++RGIT+ + I
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106
Query: 349 MNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ + + D PGH DF + D A++V+
Sbjct: 107 LRRYSH----TDCPGHSDFIKNMICGTSQMDVAVLVI 139
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/97 (26%), Positives = 44/97 (45%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHA 348
N+ + H+DHGKTTL ++ K +D +E++RGIT+ + I
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106
Query: 349 MNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ + + D PGH DF + D A++V+
Sbjct: 107 LRRYSH----TDCPGHSDFIKNMICGTSQMDVAVLVI 139
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 36.7 bits (81), Expect = 0.010
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +1
Query: 91 RIKSIKMRLVDSKKLLELQNNPSNIRN--ICIVAHVDHGKTTLA 216
R++ IK+R+ K++ + + N+R+ IC++ HVD GKT ++
Sbjct: 458 RMERIKLRIAKRKEVAQANRSTDNLRSPVICVLGHVDTGKTKIS 501
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 33.9 bits (74), Expect = 0.071
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 15/112 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRMSGKLR---------------YMDSRPDEQQ 303
N+ V HVD GK+T+ L+ G++ +R K MD+ +E++
Sbjct: 111 NMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEERE 170
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+G T++ Y + + ++D+PGH F + D A++V+
Sbjct: 171 KGKTVEVG--RAYFETEKRHF--TILDAPGHKSFVPNMIVGANQADLAVLVI 218
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 32.7 bits (71), Expect = 0.16
Identities = 28/104 (26%), Positives = 46/104 (44%)
Frame = +1
Query: 172 ICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHAM 351
+ I+ HVDHGKTTL D++ + SQ +G+ GIT + S+
Sbjct: 159 VTIMGHVDHGKTTLLDAMRN-----SQIAAGEF-----------GGITQHIGAFSVELTK 202
Query: 352 NQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVVCMNSSTND 483
+ V +D+PGH F+S + D ++VV + +
Sbjct: 203 GRR---VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE 243
>U49941-1|AAB53872.1| 609|Caenorhabditis elegans Hypothetical
protein K10B3.5 protein.
Length = 609
Score = 32.3 bits (70), Expect = 0.22
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +1
Query: 286 RPDEQQRGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVVCM 465
R ++ + G T+K S S M QE +N D G+ DFS EV TA + I
Sbjct: 80 RKEDDEYGYTIKDDSFSYPFGM-QEMTDMNGYDVYGNFDFSDEVVTAGEQTEPCINQPIP 138
Query: 466 NSSTNDIH 489
++ N++H
Sbjct: 139 TTTENELH 146
>AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid depleted
protein 3 protein.
Length = 1599
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +1
Query: 73 RVKFICRIKSIKMRLVDSKKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQ 252
RV+FI RIK L D K L++ ++ + I + A +D TLA S+I++ I+
Sbjct: 1486 RVRFIDRIKWTPPVLDDILKKLQIFDHRNTIPKVIQRAVLDPLDATLAASVIATLQIVDN 1545
Query: 253 RMSGKLRYMDSRPD 294
+ + + ++ SR D
Sbjct: 1546 KKTIQ-KFKKSRTD 1558
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQR 255
NI ++ HVD GK+T LI G I +R
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR 37
>Z99171-5|CAB16311.1| 280|Caenorhabditis elegans Hypothetical
protein F47G4.5 protein.
Length = 280
Score = 28.3 bits (60), Expect = 3.5
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Frame = +1
Query: 124 SKKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLR------YMDS 285
+KKL + +NPS +R + + +G T +++ G++++ S K+R Y
Sbjct: 94 AKKLPQSASNPSFLRKQGSSSSLSNGLWTDCIEVVNEIGVMAKMESRKIRRLRMAVYRRV 153
Query: 286 RPDEQQRGITMKSSSISLYHAMNQE---EYLVNLIDSPGHIDFSSEVSTA 426
R + + + S ++S H + +YL +ID+ +D S+ + A
Sbjct: 154 RISDDEEMVLTASRALSKCHGWTLDTCHDYLPVIIDNIISMDTSNRIIAA 203
>Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical
protein R13.2 protein.
Length = 205
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +1
Query: 109 MRLVDSKKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSR 288
+ + + ++++L NN + I + HG + S + G++ S + R R
Sbjct: 95 LSMEERTRIIQLHNNGMKVNAISKSLCISHGCVSKIISRFRATGVLLPACSPEQRKSRKR 154
Query: 289 PDEQQRGITMKSSSISLYHAM---NQEEYL 369
+ G M+ S I ++ +M N EYL
Sbjct: 155 KSSME-GSAMEQSFIPVFVSMQDANGNEYL 183
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -3
Query: 360 FLIHSVIQRYTATFHSYASLLFIWPAVHISKFSGHSLGYDSI 235
F H ++ + YA + +WP + F HS+GY I
Sbjct: 188 FRSHPILISFFPNVAEYAGVSPVWPRSLNAFFGAHSIGYPVI 229
>AF038608-14|AAT92087.1| 314|Caenorhabditis elegans Serpentine
receptor, class z protein83 protein.
Length = 314
Score = 27.1 bits (57), Expect = 8.1
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = -3
Query: 495 YDMNIISRTVHTYNNNGSIAKHYSSGNFT*KVNVPRRVYEVHQVFFLI---HSVIQR-YT 328
Y + +I+ + +NGS A F+ + V ++ F I SV + Y
Sbjct: 154 YIIFLITEAILWVLSNGSTAAEAKFDTFSSATIIIPYVLQLFSTLFYIPIMRSVRKNAYV 213
Query: 327 ATFHSYASLLFI-WPAVHISKFSGHSLGYDSITGYQGICQCGFAMV 193
+ H Y +I W AV F + + +I G C C F ++
Sbjct: 214 TSGHYYILQKYIFWQAVTALIFESFPIIFSTIQLLHGSCGCSFVVI 259
>AF022985-14|AAB69975.2| 218|Caenorhabditis elegans Hypothetical
protein T15B7.2 protein.
Length = 218
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -3
Query: 483 IISRTVHTYNNNGSIAKHYSSGNFT*KVNVPRRVYEV-HQVFFLIHSVIQRYTATFHSYA 307
I+ +TV N + + Y S F K+ + EV H + L+ S + T +
Sbjct: 21 ILVKTVLGLANGLTWPQLYESVEFELKIFQTAAILEVIHAIVGLVRSPVG--TTAMQVTS 78
Query: 306 SLLFIWPAVHISKFSGHSLG 247
++ +WP +H+ + S+G
Sbjct: 79 RVVLVWPILHLCSTARFSIG 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,313,510
Number of Sequences: 27780
Number of extensions: 255133
Number of successful extensions: 841
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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