Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328E12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC091496-1|AAH91496.1|  620|Homo sapiens FBXO21 protein protein.       31   1.9  
BC042333-1|AAH42333.1|  477|Homo sapiens FBXO21 protein protein.       31   1.9  
BC034045-1|AAH34045.1|  537|Homo sapiens FBXO21 protein protein.       31   1.9  
AF174601-1|AAF04522.1|  621|Homo sapiens F-box protein Fbx21 pro...    31   1.9  
AB020682-1|BAA74898.1|  621|Homo sapiens KIAA0875 protein protein.     31   1.9  
AK126100-1|BAC86439.1| 1197|Homo sapiens protein ( Homo sapiens ...    29   7.5  
U02519-1|AAA18942.1|  199|Homo sapiens collagen type IV alpha 3 ...    29   9.9  
AJ272268-1|CAB75962.1|  997|Homo sapiens calcium channel alpha2-...    29   9.9  
AF516696-1|AAN06673.1| 1091|Homo sapiens voltage-gated calcium c...    29   9.9  

>BC091496-1|AAH91496.1|  620|Homo sapiens FBXO21 protein protein.
          Length = 620

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 388 YAVGMICTHKKHKYTGIIRGWD 453
           Y++G+I  HK++ Y  +I GWD
Sbjct: 495 YSIGLIMKHKRYGYNCVIYGWD 516


>BC042333-1|AAH42333.1|  477|Homo sapiens FBXO21 protein protein.
          Length = 477

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 388 YAVGMICTHKKHKYTGIIRGWD 453
           Y++G+I  HK++ Y  +I GWD
Sbjct: 352 YSIGLIMKHKRYGYNCVIYGWD 373


>BC034045-1|AAH34045.1|  537|Homo sapiens FBXO21 protein protein.
          Length = 537

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 388 YAVGMICTHKKHKYTGIIRGWD 453
           Y++G+I  HK++ Y  +I GWD
Sbjct: 412 YSIGLIMKHKRYGYNCVIYGWD 433


>AF174601-1|AAF04522.1|  621|Homo sapiens F-box protein Fbx21
           protein.
          Length = 621

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 388 YAVGMICTHKKHKYTGIIRGWD 453
           Y++G+I  HK++ Y  +I GWD
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWD 517


>AB020682-1|BAA74898.1|  621|Homo sapiens KIAA0875 protein protein.
          Length = 621

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 388 YAVGMICTHKKHKYTGIIRGWD 453
           Y++G+I  HK++ Y  +I GWD
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWD 517


>AK126100-1|BAC86439.1| 1197|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44112 fis, clone TESTI4046282. ).
          Length = 1197

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 131 VVQLSCTPIELRYEESICCNNFSGQYLRI 45
           + Q  C   E  Y E I C NF G+ L+I
Sbjct: 230 ITQQPCARYEAEYGEKITCRNFIGKQLKI 258


>U02519-1|AAA18942.1|  199|Homo sapiens collagen type IV alpha 3
           protein.
          Length = 199

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -3

Query: 519 VSQILICSGPRRALSSPAAXNEIPAADYSRI-----FMFLVSAYHTNC 391
           +S+  +C GP  A++  +   +IP   +  I     F F++ AY  NC
Sbjct: 107 ISRCTVCEGPAIAIAVHSQTTDIPPCPHGWISLWKGFSFIMKAYSINC 154


>AJ272268-1|CAB75962.1|  997|Homo sapiens calcium channel
            alpha2-delta3 subunit protein.
          Length = 997

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 131  VVQLSCTPIELRYEESICCNNFSGQYLR 48
            V  ++  PIE+RY ES+ C     Q +R
Sbjct: 928  VAPITMAPIEIRYNESLKCERLKAQKIR 955


>AF516696-1|AAN06673.1| 1091|Homo sapiens voltage-gated calcium
            channel alpha(2)delta-3 subunit protein.
          Length = 1091

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 131  VVQLSCTPIELRYEESICCNNFSGQYLR 48
            V  ++  PIE+RY ES+ C     Q +R
Sbjct: 1022 VAPITMAPIEIRYNESLKCERLKAQKIR 1049


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,008,491
Number of Sequences: 237096
Number of extensions: 1345601
Number of successful extensions: 2918
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2918
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)