Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328E09f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0568 + 18591757-18592251                                         30   0.98 
02_04_0078 + 19507705-19508169                                         30   0.98 
01_06_0827 + 32260313-32260525,32261862-32262716                       28   4.0  
05_05_0010 - 21496089-21496487                                         27   9.1  
02_05_0614 + 30358737-30358923,30359797-30359844,30360590-303606...    27   9.1  

>09_04_0568 + 18591757-18592251
          Length = 164

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 126 CPKCEMQVAVASKSCKCGHTFFSARRGAD 212
           C +C  +V +    C+CGH F    R +D
Sbjct: 105 CSRCRKRVGLTGFRCRCGHLFCGEHRYSD 133


>02_04_0078 + 19507705-19508169
          Length = 154

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 117 AKSCPKCEMQVAVASKSCKCGHTFFSARR 203
           A  C  C  +V +   +C+CG TF  A R
Sbjct: 91  ASRCASCRKRVGLTGFACRCGGTFCGAHR 119


>01_06_0827 + 32260313-32260525,32261862-32262716
          Length = 355

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 102 KNKMIAKSCPKCEMQVAVASKSCKCGHTFFSARR 203
           + K  A  C  C+ +V +   +C+CG T+    R
Sbjct: 287 EKKAPANRCASCKKKVGLLGFACRCGATYCGTHR 320


>05_05_0010 - 21496089-21496487
          Length = 132

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 99  GKNKMIAKSCPKCEMQVAVASKSCKC 176
           G + MI   CP+C M V ++ +  KC
Sbjct: 73  GSSGMILAGCPRCMMYVMLSREDPKC 98


>02_05_0614 +
           30358737-30358923,30359797-30359844,30360590-30360666,
           30361517-30361969,30362051-30362602,30362704-30362937
          Length = 516

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 153 VASKSCKCGHTFFSARRGADTLPAV 227
           VA+K CKCG      R G   LPAV
Sbjct: 4   VAAKGCKCGSFSGGQRLGGVHLPAV 28


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,024,600
Number of Sequences: 37544
Number of extensions: 182343
Number of successful extensions: 375
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)