Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328E09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021457-1|AAX33605.1|  381|Drosophila melanogaster AT17750p pro...    33   0.31 
AY089238-1|AAL89976.1|  381|Drosophila melanogaster AT02742p pro...    33   0.31 
AE014297-3146|AAF55988.1|  706|Drosophila melanogaster CG13855-P...    33   0.31 

>BT021457-1|AAX33605.1|  381|Drosophila melanogaster AT17750p
           protein.
          Length = 381

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 213 CQHRDEQKRKCVRTYTILMQRLPAFHI 133
           C HRDE+KRKC  ++  +MQ     HI
Sbjct: 247 CIHRDERKRKCTTSFAFVMQPDDVRHI 273


>AY089238-1|AAL89976.1|  381|Drosophila melanogaster AT02742p
           protein.
          Length = 381

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 213 CQHRDEQKRKCVRTYTILMQRLPAFHI 133
           C HRDE+KRKC  ++  +MQ     HI
Sbjct: 247 CIHRDERKRKCTTSFAFVMQPDDVRHI 273


>AE014297-3146|AAF55988.1|  706|Drosophila melanogaster CG13855-PA
           protein.
          Length = 706

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 213 CQHRDEQKRKCVRTYTILMQRLPAFHI 133
           C HRDE+KRKC  ++  +MQ     HI
Sbjct: 572 CIHRDERKRKCTTSFAFVMQPDDVRHI 598


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,250,765
Number of Sequences: 53049
Number of extensions: 328094
Number of successful extensions: 871
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)