Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328E08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical...    29   2.0  
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ...    29   2.7  
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical...    29   2.7  
U53149-5|AAA96121.2|  427|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.1 protein.
          Length = 751

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = -1

Query: 437 DLETRVLRSQYSYNG-CPALQ-TETHYCFTAEIGRAVVPTRADSQDDHRYKVNQ*NYKDK 264
           D++    RS+  Y G C   + T+  Y      G+ VVP R  S    R +     +K+ 
Sbjct: 386 DMKLWRCRSRVVYGGNCTGYEGTQICYNSVCSQGKCVVPPRVRSATKSRIEDGNMGFKEV 445

Query: 263 CW*KKIFLPK 234
            W K + L K
Sbjct: 446 VWAKTVMLDK 455


>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = -2

Query: 175 LKLDESLKLNNLLPLNMFSTRHVS-PNTKPNDLNSQHQS*SAF----TSSPRLWWRL 20
           + L ESL L+ + P + FST++++  +T P  ++   +S +A     T +PR+W +L
Sbjct: 574 ITLQESLNLSKITPESQFSTQNLAILHTIPMKISEISKSPAASTQNDTDTPRIWLQL 630


>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = -2

Query: 175 LKLDESLKLNNLLPLNMFSTRHVS-PNTKPNDLNSQHQS*SAF----TSSPRLWWRL 20
           + L ESL L+ + P + FST++++  +T P  ++   +S +A     T +PR+W +L
Sbjct: 574 ITLQESLNLSKITPESQFSTQNLAILHTIPMKISEISKSPAASTQNDTDTPRIWLQL 630


>U53149-5|AAA96121.2|  427|Caenorhabditis elegans Hypothetical
           protein C24B5.1 protein.
          Length = 427

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 226 AISLGRKIFFYQHLSL*FYWFTLY 297
           AISLG  +F Y H +  FY +  Y
Sbjct: 373 AISLGAHVFLYTHHAFLFYLYIFY 396


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,395,078
Number of Sequences: 27780
Number of extensions: 214143
Number of successful extensions: 450
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)