Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328E04f
         (457 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736034-1|AAU50678.1|  478|Homo sapiens F-box and WD-40 repeat ...    34   0.27 
CR457160-1|CAG33441.1|  138|Homo sapiens KIAA0232 protein.             30   4.3  
AF143884-1|AAD32701.1|  138|Homo sapiens unknown protein.              30   4.3  

>AY736034-1|AAU50678.1|  478|Homo sapiens F-box and WD-40 repeat
           containing protein 9 protein.
          Length = 478

 Score = 33.9 bits (74), Expect = 0.27
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 293 EIFLQICSFLDAYFLKNTLXKXCLRFCDILXDDQLWK 403
           E+ L+ICS+LDA  + + L + C    D++ D   W+
Sbjct: 85  ELLLEICSYLDARLVLHVLSRVCHALRDLVSDHVTWR 121


>CR457160-1|CAG33441.1|  138|Homo sapiens KIAA0232 protein.
          Length = 138

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 348 SVFLRKYASKNEHICRKISIRH 283
           SVFL+KY  K + IC  +++RH
Sbjct: 61  SVFLKKYKGKGKLICPSVTLRH 82


>AF143884-1|AAD32701.1|  138|Homo sapiens unknown protein.
          Length = 138

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 348 SVFLRKYASKNEHICRKISIRH 283
           SVFL+KY  K + IC  +++RH
Sbjct: 61  SVFLKKYKGKGKLICPSVTLRH 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,517,989
Number of Sequences: 237096
Number of extensions: 728416
Number of successful extensions: 929
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)