Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328E03f
         (301 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368...    27   2.7  
03_03_0230 - 15623648-15623653,15624333-15624383,15624477-156245...    26   4.7  
03_03_0226 + 15590276-15590469,15590515-15590539,15590865-155910...    26   6.3  
02_01_0088 - 627825-628984,629339-629509,629612-630416                 26   6.3  
01_06_1183 - 35176780-35177266,35179631-35181093                       26   6.3  
07_01_0168 + 1179292-1180354,1180880-1180923                           25   8.3  
05_03_0185 + 9348559-9348958,9349560-9349687,9349782-9349808,935...    25   8.3  

>02_05_0280 +
           27435166-27435254,27436348-27436437,27436764-27436866,
           27437318-27437377,27437745-27439148,27439227-27439328,
           27439424-27439609,27439695-27439820,27439905-27440000,
           27440509-27440574
          Length = 773

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +1

Query: 7   NTCNQNSDQ*WDECFY*IKTNRRR 78
           N+ N++SDQ   +C+Y +KTNR++
Sbjct: 741 NSLNRSSDQ-ISKCYYSLKTNRKQ 763


>03_03_0230 -
           15623648-15623653,15624333-15624383,15624477-15624546,
           15624646-15624848,15625011-15625116,15625228-15625295,
           15625410-15625453,15628360-15628602,15629482-15629691,
           15630207-15630287,15630289-15630355,15632167-15632386,
           15632534-15632646,15634322-15634416,15634509-15634629
          Length = 565

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +2

Query: 254 GSPEKRLPHPK 286
           G PE+RLPHPK
Sbjct: 70  GGPEERLPHPK 80


>03_03_0226 +
           15590276-15590469,15590515-15590539,15590865-15591014,
           15591166-15591594
          Length = 265

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +3

Query: 48  LLLDQNQSTEGLASEVVNFDESG*LLQIAWSSTGDASFKCLPYQL 182
           L+LDQ  S     S +     SG +   AWSST D +F  LP  L
Sbjct: 153 LVLDQRCSVSPTTSTL-----SGRVTTTAWSSTSDIAFLQLPLLL 192


>02_01_0088 - 627825-628984,629339-629509,629612-630416
          Length = 711

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 205 YHGCHGXPGXQVSIPEREP*ETATTSQ 285
           YH C+  PG Q + P+REP    T S+
Sbjct: 291 YH-CYCGPGTQSTDPKREPCNPITASE 316


>01_06_1183 - 35176780-35177266,35179631-35181093
          Length = 649

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -1

Query: 82  RPSVD-WF*SNKSTHPITGQ 26
           R S+D WF S KST P TGQ
Sbjct: 301 RESIDRWFSSGKSTCPKTGQ 320


>07_01_0168 + 1179292-1180354,1180880-1180923
          Length = 368

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 199 CDYHGCHGXP 228
           CD+H CHG P
Sbjct: 151 CDHHDCHGGP 160


>05_03_0185 +
           9348559-9348958,9349560-9349687,9349782-9349808,
           9350250-9350369,9350474-9350563,9351206-9351292,
           9351410-9351489,9352843-9352918
          Length = 335

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 157 DASPVLDHAICKSYPDSSKLTTSDAR 80
           D SP+LDH +     D+  +T +D R
Sbjct: 248 DISPLLDHVVIGGGQDAMNVTMTDRR 273


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,492,485
Number of Sequences: 37544
Number of extensions: 156377
Number of successful extensions: 321
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)