Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328D07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003628-1|AAO39632.1|  642|Drosophila melanogaster AT28824p pro...    29   5.1  
AF173548-1|AAL29183.1|  609|Drosophila melanogaster phosphomanno...    29   5.1  
AE013599-785|AAF58988.1|  623|Drosophila melanogaster CG8073-PA,...    29   5.1  
AE013599-784|AAM68803.1|  584|Drosophila melanogaster CG8073-PB,...    29   5.1  
AY060979-1|AAL28527.1|  114|Drosophila melanogaster GM13088p pro...    28   8.8  

>BT003628-1|AAO39632.1|  642|Drosophila melanogaster AT28824p
           protein.
          Length = 642

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +3

Query: 324 RKTIVW--CLSPQCVRVTAVRIT*KSWNKNRNGFCTRSIEGSLNMR 455
           RK I W  C S  C  + AVR   K W+  R   CTR   G+  +R
Sbjct: 47  RKWIRWDKCASTACQIMDAVRA--KDWDTLRKRLCTRISFGTAGLR 90


>AF173548-1|AAL29183.1|  609|Drosophila melanogaster
           phosphomannomutase 45A protein.
          Length = 609

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +3

Query: 324 RKTIVW--CLSPQCVRVTAVRIT*KSWNKNRNGFCTRSIEGSLNMR 455
           RK I W  C S  C  + AVR   K W+  R   CTR   G+  +R
Sbjct: 14  RKWIRWDKCASTACQIMDAVRA--KDWDTLRKRLCTRISFGTAGLR 57


>AE013599-785|AAF58988.1|  623|Drosophila melanogaster CG8073-PA,
           isoform A protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +3

Query: 324 RKTIVW--CLSPQCVRVTAVRIT*KSWNKNRNGFCTRSIEGSLNMR 455
           RK I W  C S  C  + AVR   K W+  R   CTR   G+  +R
Sbjct: 28  RKWIRWDKCASTACQIMDAVRA--KDWDTLRKRLCTRISFGTAGLR 71


>AE013599-784|AAM68803.1|  584|Drosophila melanogaster CG8073-PB,
           isoform B protein.
          Length = 584

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +3

Query: 324 RKTIVW--CLSPQCVRVTAVRIT*KSWNKNRNGFCTRSIEGSLNMR 455
           RK I W  C S  C  + AVR   K W+  R   CTR   G+  +R
Sbjct: 28  RKWIRWDKCASTACQIMDAVRA--KDWDTLRKRLCTRISFGTAGLR 71


>AY060979-1|AAL28527.1|  114|Drosophila melanogaster GM13088p
           protein.
          Length = 114

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 188 SVCLACSMCLAYRNLCDCCL*NSFLY 265
           S C+ CS C +  N C CC  N FL+
Sbjct: 49  SRCVCCSCCCS-SNDCGCCSCNFFLF 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,505,419
Number of Sequences: 53049
Number of extensions: 430372
Number of successful extensions: 1045
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)