Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328D01f
(480 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0754 + 24933860-24934031,24936035-24936104,24936192-249363... 84 7e-17
01_05_0096 + 18073573-18073839,18073890-18074294 59 2e-09
07_03_0317 + 16690066-16690174,16690257-16690351,16690416-166904... 32 0.21
01_06_0764 - 31804811-31804915,31805013-31805072,31805720-318059... 32 0.21
02_03_0112 - 15363764-15364060,15364227-15364339,15364376-153644... 30 0.85
03_02_0940 + 12583131-12583280,12583805-12583996,12584185-125843... 28 4.5
10_06_0099 - 10677024-10677073,10677894-10677998,10678254-106783... 27 6.0
07_01_1034 - 8962703-8962748,8962831-8962991,8963068-8963905,896... 27 6.0
05_05_0339 + 24213179-24213821,24214402-24214623,24215035-242152... 27 6.0
03_06_0027 + 31131621-31131676,31131681-31132350,31133152-311333... 27 6.0
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 27 7.9
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 27 7.9
01_07_0128 + 41238510-41239146,41239420-41239461,41240076-412402... 27 7.9
>01_05_0754 +
24933860-24934031,24936035-24936104,24936192-24936316,
24936539-24936677,24936926-24937022,24937105-24937170,
24937478-24937616,24938149-24938258,24938355-24938459,
24938579-24938686
Length = 376
Score = 83.8 bits (198), Expect = 7e-17
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Frame = +3
Query: 90 EIKPKIKHDWYQTESQVVVTILIKNALSDQVKVQYSERSLSFSCPLPNSDSEYSLELELA 269
E+KPK +HD+Y + ++VV+TI K ++ V V + E+ LS S +P + Y + L
Sbjct: 163 EVKPKYRHDFYNSATEVVLTIFAKGVPAENVVVDFGEQMLSVSIEVP-GEEPYHFQPRLF 221
Query: 270 HEIIPTMCSYVVSPSKIEIKLRKKEGLRWNQLEGEGTEKKVKAIPQAVI----------- 416
+IIP Y V +K+EI+L K E + W L+ +KK KA+PQ +I
Sbjct: 222 SKIIPEKSRYQVLSTKVEIRLAKAEQITWTSLD---YDKKPKAVPQKIIPPVLLIALLLS 278
Query: 417 --DASGPQQPPQLFXKDWNKIE 476
A P P KDW+K+E
Sbjct: 279 AESAQRPSYPSSKSKKDWDKLE 300
>01_05_0096 + 18073573-18073839,18073890-18074294
Length = 223
Score = 58.8 bits (136), Expect = 2e-09
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 96 KPKIKHDWYQTESQVVVTILIKNALSDQVKVQYSERSLSFSCPLPNSDSEYSLELELAHE 275
KPK KHD+Y S+VVVT+ K+ ++ V V + E+ LS S E
Sbjct: 47 KPKYKHDFYNGASEVVVTVFAKSVAAEHVSVDFGEQMLSVSV-----------------E 89
Query: 276 IIPTMCSYVVSPSKIEIKLRK-KEGLRWNQLE 368
++P C Y + PSKIE++L K E + W LE
Sbjct: 90 VVPAKCRYSILPSKIEVRLAKADEQVTWTSLE 121
>07_03_0317 +
16690066-16690174,16690257-16690351,16690416-16690460,
16690495-16690581,16690687-16690749,16690859-16690896,
16691523-16691583
Length = 165
Score = 32.3 bits (70), Expect = 0.21
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 282 PTMCSYVVSPSKIEIKLRKKEGLRWNQLEGEGTEKKVKAIPQAVIDASG--PQQPPQLFX 455
PT ++ V+ + I+ LR G+ +G G+E +V + +A DAS Q + F
Sbjct: 22 PTTVAFAVAATGIKYGLRASRGVAIRAADGTGSETEVPEVVKAAQDASQFLLQLVVRPFL 81
Query: 456 KDWNKIE 476
+W K+E
Sbjct: 82 CNWAKVE 88
>01_06_0764 -
31804811-31804915,31805013-31805072,31805720-31805959,
31807367-31807525,31807653-31807769
Length = 226
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/83 (21%), Positives = 34/83 (40%)
Frame = +3
Query: 117 WYQTESQVVVTILIKNALSDQVKVQYSERSLSFSCPLPNSDSEYSLELELAHEIIPTMCS 296
W Q ++ + + ++ D+V+ + S+ + +L EI+P C
Sbjct: 84 WDQDAEKIKIYVFLEGVEQDKVETTFKPMSVDTKFHDVKGKNYRCAIPKLHKEIVPEKCK 143
Query: 297 YVVSPSKIEIKLRKKEGLRWNQL 365
+V P+KI + L K W L
Sbjct: 144 VLVKPTKIIVTLYKASKGNWLDL 166
>02_03_0112 -
15363764-15364060,15364227-15364339,15364376-15364478,
15365174-15365218
Length = 185
Score = 30.3 bits (65), Expect = 0.85
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 87 EEIKPKIKHDWYQTESQVVVTILIKNALSDQVKVQYSER-SLSFSCPLPNSDSEYSLELE 263
++I K DW + ++V ++ I LSD +K ER +L + + + E+++++E
Sbjct: 52 DDIVSKDCFDWVCSVPKIVQSLCIILRLSDDLKSYERERLTLHVASTIDSCMKEHNIDIE 111
Query: 264 LAHEII 281
+A+E I
Sbjct: 112 MAYEKI 117
>03_02_0940 +
12583131-12583280,12583805-12583996,12584185-12584350,
12584774-12584801,12585525-12585594,12586399-12586435,
12587760-12588148
Length = 343
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 292 HIVGIISCANSSSKLYSESEL 230
H VG+ C N S+LY ES +
Sbjct: 217 HTVGVAQCTNFRSRLYGESNI 237
>10_06_0099 -
10677024-10677073,10677894-10677998,10678254-10678315,
10678694-10679197,10679695-10680356,10680695-10680793,
10680881-10681110,10681227-10681278,10681391-10681577,
10681661-10681873,10682006-10682175,10683455-10683730,
10684188-10684643,10685527-10685766,10687517-10687771
Length = 1186
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 178 WSLRAFLINIVTTTCDSVWYQSCL 107
WS RA L+ ++ C SVW S +
Sbjct: 239 WSKRALLLGVLVGLCSSVWIFSSM 262
>07_01_1034 -
8962703-8962748,8962831-8962991,8963068-8963905,
8963991-8964128,8964206-8964355,8964436-8964683,
8964825-8964953,8965735-8965960,8966909-8966975,
8967488-8967551,8968902-8969000,8969074-8969157,
8969240-8969321,8969412-8969460,8969664-8969769,
8970650-8970734,8970814-8970917,8970994-8971109,
8971187-8971373,8972005-8972113,8972633-8972761,
8973365-8973449,8973812-8973947,8974078-8974230,
8974488-8974634,8974801-8974941,8975580-8975903
Length = 1400
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = +3
Query: 198 ERSLSFSCPLPNSDSEYSLELELAHEIIPTMCSYVVSPSKIEIKLRKKEGLRWNQLEGEG 377
E +++ P+P + ++E+ ++ P + V+ P K+ E R +QL+
Sbjct: 745 ENTVNPDIPIPCHEDLSAVEVVTEEQLPPAEITDVILPQKVHSSSSTPEVARSDQLKDAA 804
Query: 378 TEKKVKAIPQAVIDASGPQQPPQ 446
+ K QAV S P PQ
Sbjct: 805 ASQTPKCSIQAV-PYSTPISSPQ 826
>05_05_0339 +
24213179-24213821,24214402-24214623,24215035-24215282,
24215385-24215524,24215579-24215753
Length = 475
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 157 INIVTTTCDSVWYQSCLIFGLISSETQEFF 68
+ +VT ++VW +I GL S+ET+E F
Sbjct: 142 LKVVTNLQEAVWDADIVINGLPSTETREVF 171
>03_06_0027 +
31131621-31131676,31131681-31132350,31133152-31133319,
31134771-31134986,31135593-31135909,31136058-31136169,
31136256-31136492,31136582-31137172
Length = 788
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 309 PSKIEIKLRKKEGLRWNQLEGEGTEKKVKAIPQAV 413
PS++ ++RK E RW + G+ + +K +P+ +
Sbjct: 543 PSRLRQRVRKYERERWAAITGDEEMEMIKDLPEGL 577
>07_03_1647 + 28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 27.1 bits (57), Expect = 7.9
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +3
Query: 156 IKNALSDQVKVQYSERSLSFSCPLPNSDSEY-SLELELAHEIIPTMCSYVVSPSKIEIKL 332
I+ L + K + S + + P P S S+ SL + +C+ + S S+ +L
Sbjct: 938 IREILEREKKERASAEAENKPLPPPRSSSDVRSLRMNDFKHAHEQVCASITSDSRNMTEL 997
Query: 333 RKKEGLRWNQLEGEGTEKK 389
++WN L GEG +K
Sbjct: 998 -----IQWNDLYGEGGSRK 1011
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 114 DWYQTESQVVVTILIKNALSDQVKVQYSERSLSFSCPLPNSDSEYSLE-LELAHEIIPTM 290
D +T + VV + K++ + SL+ CP+ ++D+ +S E L +AH+++ +
Sbjct: 524 DQPETCDRSVVLVTPKSSCDQMISSSDRSCSLTLDCPV-STDAAFSSEKLSMAHDLMGSE 582
Query: 291 CSYV-VSPSKIEIKLRKKEGLRWNQL 365
V S +++ L +G + N +
Sbjct: 583 LQAVHNSKAEVVASLTDVKGAKLNSI 608
>01_07_0128 +
41238510-41239146,41239420-41239461,41240076-41240297,
41240909-41241156,41241296-41241435,41241904-41242027
Length = 470
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 157 INIVTTTCDSVWYQSCLIFGLISSETQEFF 68
+ +VT ++VW ++ GL S+ET+E F
Sbjct: 140 LKVVTNLQEAVWDADIVVNGLPSTETREVF 169
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,365,389
Number of Sequences: 37544
Number of extensions: 216258
Number of successful extensions: 614
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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