Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328C12f
         (504 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0841 + 8223768-8223871,8227749-8228745,8228779-8228828,822...    29   2.8  
03_01_0223 - 1766292-1766442,1767621-1767676,1767798-1767891,176...    27   6.5  
01_06_1334 + 36389179-36389289,36389777-36389839,36389930-363901...    27   6.5  
01_05_0141 - 18532695-18532709,18533255-18533365,18533585-185336...    27   6.5  
09_01_0051 - 862286-864670                                             27   8.6  
04_03_0361 + 14912420-14912720,14912945-14913117,14913474-149137...    27   8.6  
03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,654...    27   8.6  
02_01_0135 + 967172-967229,968316-968657,968936-969015,969063-96...    27   8.6  

>08_01_0841 +
           8223768-8223871,8227749-8228745,8228779-8228828,
           8228896-8230396
          Length = 883

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 286 LRPRWILAGTFPRNIQISSETVLSRW 363
           L+P ++    FP N  I+ ET++ RW
Sbjct: 407 LKPCFLYLSIFPENSDINVETIIDRW 432


>03_01_0223 -
           1766292-1766442,1767621-1767676,1767798-1767891,
           1768004-1768071,1768441-1769585,1770072-1770168,
           1770265-1770279
          Length = 541

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 3/94 (3%)
 Frame = +2

Query: 62  EEVLDFEREYSPSRWSPRFSTPEQVLQNHVKLVTEASLDAVIKIPHELDIEYGPTSGQKL 241
           EEV  F   Y P++ +PR+  P   L    + V  A  +   K P E    + P    + 
Sbjct: 388 EEVDYFPSRYDPAKHAPRYPIPSATLTGRREKVVIAK-ENNFKQPGERYRSWDPARQDRF 446

Query: 242 DIFGTDLPNDARIFVYVHG---GYWQELSREISR 334
                D  +D R+   +      YW +  R + +
Sbjct: 447 IKRWIDALSDPRLTHEIRSIWLSYWSQADRSLGQ 480


>01_06_1334 +
           36389179-36389289,36389777-36389839,36389930-36390169,
           36390245-36390916
          Length = 361

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +2

Query: 194 PHELD-IEYGPTSGQKLDIFGTDLPNDARIFVYVHGGYWQELSR 322
           P  LD IE  PTS +K ++F   + +DA++F  V  G+W ++ +
Sbjct: 181 PSVLDRIELKPTSIEK-EVFPR-IASDAKLFALVLPGFWMDVGQ 222


>01_05_0141 -
           18532695-18532709,18533255-18533365,18533585-18533617,
           18534011-18534140,18534219-18535660,18535990-18536358
          Length = 699

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 283 RLRPRWILAGTFPRNIQISSETVLSRW 363
           RL+P ++L   +PRN+  + + ++  W
Sbjct: 423 RLKPCFLLCSLYPRNLGFTKDDIIQLW 449


>09_01_0051 - 862286-864670
          Length = 794

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +2

Query: 86  EYSPSRWSPRFSTPEQVLQNHVKLVTEASLDAVIKIPHELDIEYGPTSGQKLDIF 250
           +Y P +++  F    +VL N  K + + SLD  ++   ++D EYG  S     I+
Sbjct: 630 DYLPKKYN--FPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIW 682


>04_03_0361 +
           14912420-14912720,14912945-14913117,14913474-14913779,
           14913862-14913936,14913976-14914191,14914741-14915527,
           14915587-14915681
          Length = 650

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 259 VRSKNIEFLSRCGSIFYIQFMRYFNDCI*ASFG 161
           ++ ++ +F +    + Y++F  YFNDCI A  G
Sbjct: 518 IKPRDPQFATLHSRLRYLRFYPYFNDCIGAIDG 550


>03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,
            6541815-6543215,6543268-6543357,6543800-6544515,
            6545549-6545707,6545877-6546186,6546794-6546861,
            6547354-6547896
          Length = 1247

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = +2

Query: 50   LTMSEEVLDFEREYSPSRWSPRFSTPEQVLQNHVKLVTEASLDA 181
            L + EE++  + EY+P +++ +   P ++++  +K   E SL A
Sbjct: 1064 LNLQEEIVQHDPEYAPDKYTTKPFRPLELIEMCLKGDRELSLKA 1107


>02_01_0135 + 967172-967229,968316-968657,968936-969015,969063-969698,
            969819-971527,971563-972514,972821-973273,974303-974497
          Length = 1474

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -2

Query: 134  LVLGLRIVVTNDSVNILVQNPKLPLTSLIKQL 39
            LV GLR +  ND  ++LVQ P +P +SLI  L
Sbjct: 1025 LVCGLRELTINDCPSLLVQFP-IPPSSLISFL 1055


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,926,229
Number of Sequences: 37544
Number of extensions: 270613
Number of successful extensions: 843
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)