Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328C12f
         (504 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089670-1|AAL90408.1|  300|Drosophila melanogaster RH42281p pro...    54   1e-07
AE014134-1102|AAF52391.1|  300|Drosophila melanogaster CG9542-PA...    54   1e-07
AY089266-1|AAL90004.1|  263|Drosophila melanogaster AT06251p pro...    28   8.3  
AE014297-2113|AAF55253.1|  263|Drosophila melanogaster CG5478-PA...    28   8.3  

>AY089670-1|AAL90408.1|  300|Drosophila melanogaster RH42281p
           protein.
          Length = 300

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
 Frame = +2

Query: 74  DFEREYSPSRWSPRFST-PEQ---VLQNHVKLVTEASLDAVIKIPHELD-IEYGPTSGQK 238
           D +R+Y PS  + RF   PE    VL++ V++  +   +   K    +D + YG    Q 
Sbjct: 8   DLDRDYFPSYHTTRFQDQPEPNLAVLEHFVRVTKQHGRELTEKQGITVDHLRYGE-GRQL 66

Query: 239 LDIFGTD-LPNDARIFVYVHGGYWQELSREISRYPVKPFYRGGIK 370
           +D+F ++   N A +FV+VHGGYWQE+   +S   V P  R G +
Sbjct: 67  VDVFYSEKTTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYR 111



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +3

Query: 378 IIGYDLCPTVTLGEIIKEIQNAAKYVFEYAE 470
           ++ Y+LCP VTL +++ +  +   ++F+Y E
Sbjct: 114 VMDYNLCPQVTLEQLMTQFTHFLNWIFDYTE 144


>AE014134-1102|AAF52391.1|  300|Drosophila melanogaster CG9542-PA
           protein.
          Length = 300

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
 Frame = +2

Query: 74  DFEREYSPSRWSPRFST-PEQ---VLQNHVKLVTEASLDAVIKIPHELD-IEYGPTSGQK 238
           D +R+Y PS  + RF   PE    VL++ V++  +   +   K    +D + YG    Q 
Sbjct: 8   DLDRDYFPSYHTTRFQDQPEPNLAVLEHFVRVTKQHGRELTEKQGITVDHLRYGE-GRQL 66

Query: 239 LDIFGTD-LPNDARIFVYVHGGYWQELSREISRYPVKPFYRGGIK 370
           +D+F ++   N A +FV+VHGGYWQE+   +S   V P  R G +
Sbjct: 67  VDVFYSEKTTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYR 111



 Score = 31.9 bits (69), Expect = 0.51
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +3

Query: 378 IIGYDLCPTVTLGEIIKEIQNAAKYVFEYAE 470
           ++ Y+LCP VTL +++ +  +   ++F+Y E
Sbjct: 114 VMDYNLCPQVTLEQLMTQFTHFLNWIFDYTE 144


>AY089266-1|AAL90004.1|  263|Drosophila melanogaster AT06251p
           protein.
          Length = 263

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 344 SLDIWIFLGKVPASIHRGRKRISEHH 267
           S+D+W+   K+  ++HRG +R  +HH
Sbjct: 52  SMDVWV---KMMENLHRGVERFQKHH 74


>AE014297-2113|AAF55253.1|  263|Drosophila melanogaster CG5478-PA
           protein.
          Length = 263

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 344 SLDIWIFLGKVPASIHRGRKRISEHH 267
           S+D+W+   K+  ++HRG +R  +HH
Sbjct: 52  SMDVWV---KMMENLHRGVERFQKHH 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,814,873
Number of Sequences: 53049
Number of extensions: 456023
Number of successful extensions: 1246
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)