Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328C10f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0151 + 1067067-1067222,1067586-1067690,1067904-1067990,106... 86 2e-17
04_04_1360 + 32889597-32890343 68 4e-12
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13... 48 3e-06
03_06_0526 - 34515218-34515372,34515454-34515567,34515651-345157... 44 1e-04
07_03_0955 + 22867448-22868248 42 2e-04
03_01_0302 - 2361948-2362649,2363422-2363617,2363873-2363997,236... 40 0.001
07_03_1453 - 26649922-26650064,26650148-26650244,26651260-266514... 38 0.005
04_04_0349 + 24588184-24588315,24588481-24588543,24588674-245887... 37 0.011
03_02_0334 + 7570568-7570709,7571622-7571844,7572178-7572257,757... 36 0.020
05_01_0308 + 2434642-2434736,2435176-2435245,2435435-2435566,243... 35 0.034
09_04_0721 + 19725695-19725697,19725793-19725859,19725944-197260... 35 0.046
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 33 0.14
05_05_0091 + 22319411-22320901 31 0.56
06_01_0375 + 2699179-2699264,2699697-2699786,2699913-2699991,270... 31 0.74
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 31 0.74
02_05_0862 - 32305562-32305654,32305935-32306033,32306178-323062... 30 1.3
06_03_0878 + 25606788-25606926,25607205-25607279,25607362-256074... 29 2.3
06_01_0939 + 7232682-7232933,7233048-7233228,7233354-7233463,723... 29 3.0
02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680... 29 3.0
07_03_1704 + 28839628-28839908,28840010-28840123,28840416-288407... 28 4.0
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 28 4.0
05_04_0096 - 17931061-17931435,17931539-17931620,17932319-179324... 28 4.0
06_01_0265 - 1961511-1962497 28 5.2
04_01_0067 - 673381-673387,675388-678131 27 6.9
01_05_0610 - 23636097-23638958 27 6.9
12_02_0903 - 24179533-24180120 27 9.1
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144... 27 9.1
>02_01_0151 +
1067067-1067222,1067586-1067690,1067904-1067990,
1068071-1068121,1068265-1068291,1068292-1068385,
1068610-1068845
Length = 251
Score = 85.8 bits (203), Expect = 2e-17
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Frame = +1
Query: 55 LEIVIPELLSAGYSFYTWPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAAKCGAL 234
L + I E + Y + WP + +LA Y+W QR V+ELG GT LPG++AAK GA
Sbjct: 46 LRVDIIENIEEDYGMFVWPCSVILAEYVWQQRSRFTASTVVELGAGTSLPGLVAAKVGAD 105
Query: 235 VTLTDSLTLPRSLRHLSACCEANGL--VPNRD---LQIVGLTWGLFLGDLHNLRPVDLIL 399
VTLTD L ++ C N + N+ +Q++GLTWG + +L P D+IL
Sbjct: 106 VTLTDIAHNTEVLNNIRQVCGLNNVNCTLNKSTTLMQVLGLTWGEWDEPTFDLHP-DVIL 164
Query: 400 ASDCFYEPSQ 429
+D Y+ ++
Sbjct: 165 GADVLYDSAR 174
>04_04_1360 + 32889597-32890343
Length = 248
Score = 68.1 bits (159), Expect = 4e-12
Identities = 50/131 (38%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Frame = +1
Query: 100 YTWPSAPLLAWYLWT--QRRHIRGLRVLELGCGTGLPGILAAKC--GALVTLTDSLTLPR 267
+ W S+ +LA +L + H+RG VLELG GTGLPGI A C A LTD L
Sbjct: 46 WLWDSSLVLASHLASCVHHHHLRGATVLELGAGTGLPGIAAVACLGAARCVLTDVRPLLP 105
Query: 268 SLRHLSACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCFYEPSQFEEVLS 447
LR A +ANGL + + L WG G L VD++L SD FY+P +
Sbjct: 106 GLR---ANADANGLTAEQ-ADVRELRWG---GHLEPEVQVDVVLMSDVFYDPDDMPAMAD 158
Query: 448 TVAYLLEGTDA 480
T+ L D+
Sbjct: 159 TLHGLWRDGDS 169
>06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-133271,
133389-133448,133536-133588,133671-133837,133963-134167,
134989-135046,135225-135281,135363-135608,135938-136002,
136090-136158,136238-136331,136467-136607,137159-137304,
137452-138110,138222-138335,138406-138560
Length = 1163
Score = 48.4 bits (110), Expect = 3e-06
Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +1
Query: 157 IRGLRVLELGCGTGLPGILAAKCGALVTLTDSLTLPRSLRHLSACCEAN-GLVPNRDLQI 333
+R R LELG G GL G +AA GA V LTD LP L+ L + N G ++
Sbjct: 998 LRAARALELGAGCGLAGCVAALLGAHVLLTD---LPDRLKLLRKNIDLNVGDDARGSARV 1054
Query: 334 VGLTWGLF-LGDLHNLRPVDLILASDCFYEPSQFEEVLSTVAYL 462
L W DL N P+D +L SD Y +++L T+ +L
Sbjct: 1055 AQLVWADDPHPDLLN-PPLDYVLGSDVIYSEEAVDDLLLTLKHL 1097
>03_06_0526 -
34515218-34515372,34515454-34515567,34515651-34515722,
34515832-34515974,34516457-34516635,34517798-34517874,
34517994-34518150
Length = 298
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = +1
Query: 106 WPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAAKCGALVTLTDSLTLPRSLRHLS 285
WP L A +L + + G R+LELG GTG I K + T +++
Sbjct: 111 WPGTFLFADWLVKNKSILHGRRILELGSGTGALAIFLRKAFQVDITTTDYDDGEIQENIA 170
Query: 286 ACCEAN--GLVPNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCFYEPSQFEEVLSTVAY 459
C+AN G++P+ + TWG L + D+++ASD Q+ + T+++
Sbjct: 171 YNCKANDLGVLPH-----IRHTWGDQFPVL--IPDWDIVIASDILLYVKQYPNLTRTLSF 223
Query: 460 LLE 468
LL+
Sbjct: 224 LLK 226
>07_03_0955 + 22867448-22868248
Length = 266
Score = 42.3 bits (95), Expect = 2e-04
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Frame = +1
Query: 61 IVIPELLSAGYSFYTWPSAPLL-----AWYLWTQRRHI--RGLRVLELGCGTGLPGI-LA 216
I + L S G +F WPSA L A L R L +LELG GTG G+ LA
Sbjct: 58 ITVRTLPSLGLTFQLWPSASTLLRVLPASPLLLSRAPTPESPLGILELGSGTGAAGLALA 117
Query: 217 AKCGALVTLTDSLTLPRSLRHLSACCEANGL-VPNRDLQIVGLTWGLFLGDLHNLRP--- 384
A A L+D +LRH +A A L + +V L WG P
Sbjct: 118 AALPAHAVLSDLPAALPNLRH-NASLNAPLLDARGGSVSVVPLPWGDAAAMEAVAAPPPA 176
Query: 385 --VDLILASDCFYEPSQFEEVLSTVAYLLEGTDARFLCSYQER 507
DL++ASD Y + + ++ T+ + ++G + F+ ++ R
Sbjct: 177 SRFDLVVASDVVYYEALVDPLIETMRFFVKG-EVVFVMAHMRR 218
>03_01_0302 -
2361948-2362649,2363422-2363617,2363873-2363997,
2364118-2364180,2364445-2364495,2364597-2364668,
2364779-2364886,2365031-2365135,2365505-2365555,
2365971-2365995,2366234-2366258,2366352-2366439
Length = 536
Score = 40.3 bits (90), Expect = 0.001
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 13/150 (8%)
Frame = +1
Query: 106 WPSAPLLAWYLWTQRRHIRGLRVLELGCGT-GLPGILAAKCGALVTLTDSLTLPRSLRHL 282
W SA + L + G RVLELGCG+ G+ ++AA V TD L
Sbjct: 337 WESAQFMCSVLAENPSILAGKRVLELGCGSAGICSMVAATVAQFVVATDGDAESLDLLRE 396
Query: 283 SACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRPV----------DLILASDCFYEPSQF 432
+ A+ L P DL L LF GD +L+ V D I+ +D Y P
Sbjct: 397 NT---ASNLEP--DLLKKILIRKLFWGDKDDLKAVRELSSDGAGFDCIIGTDVTYNPDAI 451
Query: 433 EEVLSTVAYLL--EGTDARFLCSYQERSTD 516
+ T L+ + +DA + Y +R D
Sbjct: 452 FPLFKTARELISNKDSDAALILCYIQRRVD 481
>07_03_1453 -
26649922-26650064,26650148-26650244,26651260-26651418,
26651478-26651603
Length = 174
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 106 WPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAAKCGALVTLTD 249
WP A L+ YL ++ ++ELG G G+ GIL ++ V LTD
Sbjct: 98 WPGAVLMNTYLSEHPETVKDHSIIELGSGVGITGILCSRFCKEVVLTD 145
>04_04_0349 +
24588184-24588315,24588481-24588543,24588674-24588740,
24588819-24588919,24589082-24589126,24589236-24589697,
24589905-24590075
Length = 346
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 160 RGLRVLELGCGTGLPGILAAKCGA 231
RG RVLELGCG+GL GI A GA
Sbjct: 115 RGKRVLELGCGSGLAGIFACLKGA 138
>03_02_0334 +
7570568-7570709,7571622-7571844,7572178-7572257,
7572869-7572929,7573670-7573796
Length = 210
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 106 WPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAA 219
WPS +LA+Y R +VLELG G GL G+ A
Sbjct: 151 WPSEEVLAYYCINHSDMFRSKKVLELGSGYGLAGLAIA 188
>05_01_0308 +
2434642-2434736,2435176-2435245,2435435-2435566,
2435659-2435722,2435786-2435855,2435952-2436036,
2437572-2437628,2437894-2438010,2438267-2438337,
2438703-2439045
Length = 367
Score = 35.1 bits (77), Expect = 0.034
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Frame = +1
Query: 106 WPSAPLLAWYLWTQRRHIRGLRVLELGCGTGLPGILAAKCGA---LVTLTDSLTLPR--- 267
WPS L+ ++ + + ELG G GL G+ A ++T D+ TL
Sbjct: 148 WPSGLFLSEFILSYPKIFSRKCCFELGSGVGLVGVCLNYVSASKVILTDGDASTLENMKG 207
Query: 268 SLRHLSACCEANG-LVPNRD---LQIVGLTW-GLFLGDLHNLRPVDLILASDCFYEPSQF 432
++ + C E G +P + +Q L+W DL + RP DL+L +D Y+P
Sbjct: 208 NMEMNNLCVEQEGSQLPEENKNKVQCKYLSWEETSESDLWDCRP-DLVLGADIIYDPVCV 266
Query: 433 EEVLSTVAYLL 465
++ ++ LL
Sbjct: 267 PHLIRVLSMLL 277
>09_04_0721 +
19725695-19725697,19725793-19725859,19725944-19726044,
19726780-19726824,19727052-19727522,19727972-19728142
Length = 285
Score = 34.7 bits (76), Expect = 0.046
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +1
Query: 160 RGLRVLELGCGTGLPGILAAKCGA 231
R +VLELGCG GLPGI A GA
Sbjct: 51 RSKQVLELGCGYGLPGIFACLKGA 74
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 157 IRGLRVLELGCGTGLPGILAAKCGA 231
+ G VL++GCGTG+ + AAK GA
Sbjct: 290 MNGATVLDVGCGTGILSLFAAKAGA 314
>05_05_0091 + 22319411-22320901
Length = 496
Score = 31.1 bits (67), Expect = 0.56
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -1
Query: 320 RLGTKPLASQQAER*RSDLGNVRLSVRVTSAPHFAASIPGSPVPHPNSNTLRPRICRLCV 141
RL + L SQ E+ + +V V F A +PG P P P + + R+ +L +
Sbjct: 207 RLKEESLWSQSYEKAVILMARAACAVFVRVCVVFGAHVPGLPPPLPPAEAVHSRLSKLLL 266
Query: 140 HKYQAS 123
H A+
Sbjct: 267 HPMSAA 272
>06_01_0375 +
2699179-2699264,2699697-2699786,2699913-2699991,
2700816-2700893,2701290-2701338,2702183-2702232,
2702704-2702853,2703437-2703517,2703593-2703609,
2705804-2705893,2706033-2706111,2706234-2706311,
2707554-2707687,2707858-2707936,2708108-2708188,
2708263-2708400
Length = 452
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 157 IRGLRVLELGCGTGLPGILAAKCGALVTLTDSL 255
+ GL+V+++GCG G+ A+ GA VT D++
Sbjct: 68 LEGLKVIDVGCGGGILSEPLARMGATVTGIDAV 100
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 157 IRGLRVLELGCGTGLPGILAAKCGALVTLTDS 252
+ GL+++++GC G+ A+ GA VT D+
Sbjct: 266 LEGLKIIDVGCAAGMLSEPLARMGATVTGIDA 297
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 30.7 bits (66), Expect = 0.74
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 148 RRHIRGLRVLELGCGTGLPGILAAKCGA 231
++ I G V+++GCGTG+ + A+ GA
Sbjct: 79 QKFIEGKVVMDVGCGTGILSVFCARAGA 106
>02_05_0862 -
32305562-32305654,32305935-32306033,32306178-32306259,
32307407-32307764,32308745-32309521,32309612-32309716,
32309803-32309911,32311016-32311024
Length = 543
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -1
Query: 230 APHFAASIP-GSPVPHPNSNTLRPRI 156
A H +S+P G P+ PNSN L+P +
Sbjct: 372 ARHSCSSLPSGHPIKEPNSNALKPEV 397
>06_03_0878 +
25606788-25606926,25607205-25607279,25607362-25607426,
25607504-25607606,25607712-25607762,25608271-25608424,
25608781-25608925,25609039-25609144,25609267-25609415
Length = 328
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 163 GLRVLELGCGTGLPGILAAKCGALVTLTD 249
G+ +E+G GTGL G+ A+ + +TD
Sbjct: 117 GVTAIEIGAGTGLVGLALARVAKKIFITD 145
>06_01_0939 +
7232682-7232933,7233048-7233228,7233354-7233463,
7233833-7233911,7233979-7234046,7234129-7234195,
7234704-7234834
Length = 295
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 148 RRHIRGLRVLELGCGTGLPGILAA 219
R + G+R++++G G GLPG++ A
Sbjct: 117 RGDLGGMRLVDVGSGAGLPGLILA 140
>02_03_0172 +
15965342-15965711,15967757-15967849,15967976-15968060,
15968749-15968824,15968992-15969120,15969473-15969571,
15969661-15969762,15970257-15970415,15970507-15970602,
15971497-15971647,15971782-15971893,15972004-15972074,
15972548-15972984,15973421-15973492,15973713-15973810,
15974350-15974425,15975512-15975634,15975776-15975844
Length = 805
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 437 SSNCDGS*KQSDARIRSTGRKLCRSPKNKPHVRPTICKSRLGTKPLASQQAER*RS 270
S NC ++ R +GR+ +P+N PH PT +S G + +S +R RS
Sbjct: 492 SDNCHRIGYGGNSANRKSGREYKETPENTPHTGPTSDQSPEGCR--SSNYLQRKRS 545
>07_03_1704 + 28839628-28839908,28840010-28840123,28840416-28840769,
28841072-28841268,28841496-28841587,28841700-28842027,
28842328-28842535,28843555-28843669,28844023-28844190,
28844804-28845476,28845552-28845758,28845911-28847001
Length = 1275
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 37 DTRGEYLEIVIPELLSAGYSFYTWPSAPLLAWYLWTQR 150
D EY+ + + L +WPS P++A LWTQ+
Sbjct: 936 DKSSEYIHAISGQALENCAGGSSWPSMPIIA-ALWTQK 972
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 154 HIRGLRVLELGCGTGLPGILAAKCGA 231
H RG VL++G G+G+ I +A+ GA
Sbjct: 65 HFRGKVVLDVGTGSGILAIWSAQAGA 90
>05_04_0096 -
17931061-17931435,17931539-17931620,17932319-17932446,
17932523-17932621,17932739-17932894,17934120-17934194,
17934582-17934749,17934825-17934993,17936640-17936923
Length = 511
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 286 ACCEANGLVPNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCF-YEPSQFEEVLSTVAYL 462
A ++ G V N + +V + WG F L P D+ ++ + Y FE+++S V YL
Sbjct: 270 AIIKSLGRVTNSERTVVNVEWGSFRPPQIELTPYDICFNNETWNYYDQGFEKMISGV-YL 328
Query: 463 LE 468
E
Sbjct: 329 GE 330
>06_01_0265 - 1961511-1962497
Length = 328
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 135 LVDAKATYSRSESVGVRVRNRTAGNTSREVRS-ARNPDRQSNIT 263
LVD+ AT++R VGV V + T T+ VR P N+T
Sbjct: 151 LVDSVATFARRRQVGVCVLSATGAVTNVSVRQPGAGPGAVVNLT 194
>04_01_0067 - 673381-673387,675388-678131
Length = 916
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = +1
Query: 151 RHIRGLRVLELGCGTGLPGILAAKCGALVTLTDSLTLPRSLRHL 282
R IR LRVL+L C + L G LV L L+LPR+L L
Sbjct: 587 RKIRNLRVLDLSCSNFVQ--LPNSIGELVHLR-YLSLPRTLNML 627
>01_05_0610 - 23636097-23638958
Length = 953
Score = 27.5 bits (58), Expect = 6.9
Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 4/138 (2%)
Frame = +1
Query: 76 LLSAGYSFYTWPSAPLLAWY-LWTQRR--HIRGLRVLELGCGTGLPGILAAKCGALVTLT 246
LL G +W W +W HI L + C LP + + G ++
Sbjct: 51 LLDPGNLLSSWEGDDCCQWNGVWCNNETGHIVELNLPGGSCNI-LPPWVPLEPGLGGSIG 109
Query: 247 DSLTLPRSLRHLSACCEA-NGLVPNRDLQIVGLTWGLFLGDLHNLRPVDLILASDCFYEP 423
SL + L HL C +G +P FLG LHNLR +DL ++ P
Sbjct: 110 PSLLGLKQLEHLDLSCNNFSGTLPE------------FLGSLHNLRSLDLSWSTFVGTVP 157
Query: 424 SQFEEVLSTVAYLLEGTD 477
Q LS + Y G++
Sbjct: 158 PQLGN-LSNLRYFSLGSN 174
>12_02_0903 - 24179533-24180120
Length = 195
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 218 AASIPGSPVPHPNSNTLRPRICRLCVHKYQASRGADGH 105
AA+ S P P+S + C C+ K+ +S+ GH
Sbjct: 53 AANCSESEAPKPSSAPHKVFSCNFCMRKFFSSQALGGH 90
>05_01_0201 -
1441063-1443836,1444658-1445758,1446367-1447179,
1447386-1447440
Length = 1580
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 81 VSRLFVLHVAICASASLVLVDAKATYSRSESVGVRVRNRTAGNTSREVRSARNP 242
VS+L +L +I ++ + +SV V RNRT + V A+NP
Sbjct: 361 VSKLLLLKESISKELEKTELEIDSLEGELKSVNVEARNRTLKDPPTAVTYAQNP 414
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,215,921
Number of Sequences: 37544
Number of extensions: 294965
Number of successful extensions: 944
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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