Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328C06f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 217 1e-57
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 214 8e-57
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 170 1e-43
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 142 3e-35
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 132 2e-32
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 42 6e-05
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 38 0.001
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 29 0.32
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 29 0.42
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 1.3
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 1.3
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 27 2.2
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 5.2
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 25 5.2
SPAC29A4.13 |||urease accessory protein UreF|Schizosaccharomyces... 25 6.8
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 25 9.0
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 217 bits (529), Expect = 1e-57
Identities = 109/165 (66%), Positives = 120/165 (72%)
Frame = +1
Query: 1 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE +L GD
Sbjct: 322 SKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGD 381
Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
SE+ QD GIETAGGVMT LIKRN YSDNQPGVLIQVF
Sbjct: 382 TSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVF 441
Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
EGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNV
Sbjct: 442 EGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNV 486
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 214 bits (522), Expect = 8e-57
Identities = 107/165 (64%), Positives = 120/165 (72%)
Frame = +1
Query: 1 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE IL GD
Sbjct: 322 SKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGD 381
Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
SE+ QD GIETAGGVMT LIKRN Y+DNQPGVLIQVF
Sbjct: 382 TSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVF 441
Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
EGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNV
Sbjct: 442 EGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNV 486
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 170 bits (413), Expect = 1e-43
Identities = 89/165 (53%), Positives = 108/165 (65%)
Frame = +1
Query: 1 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE +L G+
Sbjct: 354 SNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGE 412
Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
+ + + GIET GGVMT LI RN DNQ VLIQV+
Sbjct: 413 EGSD--NIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVY 470
Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L V
Sbjct: 471 EGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTV 515
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 142 bits (344), Expect = 3e-35
Identities = 73/166 (43%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Frame = +1
Query: 1 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE +L
Sbjct: 326 SKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNK 385
Query: 181 K-SEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQV 357
S++ QD G+ G V + RN +DNQ V V
Sbjct: 386 ADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPV 445
Query: 358 FEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V
Sbjct: 446 YQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKV 491
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 132 bits (320), Expect = 2e-32
Identities = 69/165 (41%), Positives = 97/165 (58%)
Frame = +1
Query: 1 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
A + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE +L G
Sbjct: 370 ANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLSG- 427
Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
V+D GIET GGV T LI RN +D Q V I+VF
Sbjct: 428 ---HVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVF 484
Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
+GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NV
Sbjct: 485 QGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINV 529
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 41.9 bits (94), Expect = 6e-05
Identities = 16/44 (36%), Positives = 31/44 (70%)
Frame = +1
Query: 1 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 132
A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 358 ANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 37.5 bits (83), Expect = 0.001
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = +1
Query: 1 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 132
A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 330 AGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 29.5 bits (63), Expect = 0.32
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 1 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 117
A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 348 ANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 29.1 bits (62), Expect = 0.42
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 281 TLPSPLNRLRHSPPTLITNLEYSSKYLR 364
T P RLRH+P I LE KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 1.3
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = -3
Query: 213 KQQQILHLLR-LVTVQDSSLDSCTISYG-LVRVNRFV--ELLSIKEILQELLHLGDTSGA 46
K QQ+L LL LV D+ +DS + L ++ V S+ ELL LGD S
Sbjct: 932 KHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLKGTTSLANHTNELLGLGDESLC 991
Query: 45 THQYNIVDLSLIHL 4
+ I D SL+ L
Sbjct: 992 NLETTIEDTSLVKL 1005
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1
Query: 500 RKTLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 360
R+ L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 75 REVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 500 RKTLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARS 366
R L IP+AS K S T G G S + P L++ + R+
Sbjct: 483 RNNLAIPIASRRKSVSAVNTLYGVGSSYTSESFPFSKLTVPVERN 527
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.4 bits (53), Expect = 5.2
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -3
Query: 351 DEYSRLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTV 172
D+YS L + + EC+++F + D S+ N EGK ++L LL
Sbjct: 343 DQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDEGNA 401
Query: 171 QDSSLDSCTISYGLVR 124
++S+ + Y + R
Sbjct: 402 EESTKIRLLLLYIIYR 417
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 287 PSPLNRLRHSPPTLITNLEYSSKYLRXSVL*PKITTCSVNSS*PGSH 427
PSP+ L ++++ S Y L P+IT S+N P H
Sbjct: 794 PSPIRLLSQKSLASVSSVSSISTYSSSIELTPQITKTSLNREKPALH 840
>SPAC29A4.13 |||urease accessory protein UreF|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 235
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 405 FTEQVVIFGHSTLXLKYLDEYSRLV 331
+T+ + F ST KYLDEY R V
Sbjct: 105 WTKSLSFFVTSTDVFKYLDEYERRV 129
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 32 LYWWVAPLVSPRCRSSCKISLMERSSTNLL 121
LYW V C+S IS + SST+LL
Sbjct: 540 LYWDVQAAKDVDCKSVVDISQLRVSSTSLL 569
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.138 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,068,434
Number of Sequences: 5004
Number of extensions: 37975
Number of successful extensions: 101
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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