SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328C06f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical pr...   239   1e-63
M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein ( C.ele...   239   1e-63
Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical pr...   210   6e-55
Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical pr...   210   6e-55
Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical pr...   204   2e-53
U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock prot...   177   4e-45
M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C. el...   177   4e-45
AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock pr...   163   5e-41
U88315-3|AAB42371.1|  657|Caenorhabditis elegans Heat shock prot...   146   8e-36
M28528-1|AAA28076.1|  288|Caenorhabditis elegans protein ( C.ele...   136   7e-33
X07678-1|CAA30525.1|  487|Caenorhabditis elegans hsp6F protein.        97   5e-21
Z81113-10|CAB54300.1|  607|Caenorhabditis elegans Hypothetical p...    91   6e-19
Z81059-7|CAB54217.1|  607|Caenorhabditis elegans Hypothetical pr...    91   6e-19
Z49967-2|CAA90248.2|  450|Caenorhabditis elegans Hypothetical pr...    43   1e-04
U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical pr...    40   0.001
L09634-1|AAA27967.1|  776|Caenorhabditis elegans Hypothetical pr...    39   0.002
Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical pr...    38   0.003
Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical pr...    38   0.003
Z92849-8|CAB07427.3|  523|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U29097-9|AAA68416.2|  343|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF125450-4|AAD12818.1|  343|Caenorhabditis elegans Hypothetical ...    27   8.1  
AF016682-7|AAB66191.2|  343|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical
           protein F26D10.3 protein.
          Length = 640

 Score =  239 bits (584), Expect = 1e-63
 Identities = 120/165 (72%), Positives = 125/165 (75%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
           AKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE           IL GD
Sbjct: 325 AKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGD 384

Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
           KSE VQD           GIETAGGVMT LIKRN             YSDNQPGVLIQV+
Sbjct: 385 KSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVY 444

Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
           EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNV
Sbjct: 445 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 489


>M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 70A gene, complete cds. ).
          Length = 640

 Score =  239 bits (584), Expect = 1e-63
 Identities = 120/165 (72%), Positives = 125/165 (75%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
           AKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE           IL GD
Sbjct: 325 AKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILSGD 384

Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
           KSE VQD           GIETAGGVMT LIKRN             YSDNQPGVLIQV+
Sbjct: 385 KSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVY 444

Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
           EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNV
Sbjct: 445 EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 489


>Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.5 protein.
          Length = 645

 Score =  210 bits (512), Expect = 6e-55
 Identities = 103/165 (62%), Positives = 119/165 (72%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
           AK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE           +L G 
Sbjct: 325 AKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGV 384

Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
           K E ++D           GIETAGGVMT LI RN             Y+DNQPGV IQV+
Sbjct: 385 KDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVY 444

Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
           EGERAMT+DN+ LG FEL+GIPPAPRGVPQIEVTFDIDANGILNV
Sbjct: 445 EGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNV 489


>Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.4 protein.
          Length = 645

 Score =  210 bits (512), Expect = 6e-55
 Identities = 103/165 (62%), Positives = 119/165 (72%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
           AK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE           +L G 
Sbjct: 325 AKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGV 384

Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
           K E ++D           GIETAGGVMT LI RN             Y+DNQPGV IQV+
Sbjct: 385 KDETIKDVLLVDVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVY 444

Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
           EGERAMT+DN+ LG FEL+GIPPAPRGVPQIEVTFDIDANGILNV
Sbjct: 445 EGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNV 489


>Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical
           protein C12C8.1 protein.
          Length = 643

 Score =  204 bits (499), Expect = 2e-53
 Identities = 100/165 (60%), Positives = 117/165 (70%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
           AK DK +I ++VLVGGSTRIPK+QKLL++FFNGK+LN SINPDE           +L G 
Sbjct: 325 AKTDKGRIDEVVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQAAVLSGV 384

Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
           K + ++D           GIETAGGVMT LI RN             Y+DNQPGV IQV+
Sbjct: 385 KDDTIKDVLLVDVVPLSHGIETAGGVMTNLIDRNTRIPAKASKTFTTYADNQPGVSIQVY 444

Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
           EGERAMT+DN+ LG FELTGIPPAPRGVPQ++VTFDIDANGILNV
Sbjct: 445 EGERAMTRDNHRLGTFELTGIPPAPRGVPQVDVTFDIDANGILNV 489


>U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock protein
           protein 3 protein.
          Length = 661

 Score =  177 bits (431), Expect = 4e-45
 Identities = 89/163 (54%), Positives = 109/163 (66%)
 Frame = +1

Query: 7   MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 186
           + K  +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE           ++ G+  
Sbjct: 356 LKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE-- 413

Query: 187 EEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEG 366
           E+  +           GIET GGVMT LI RN              +DNQP V IQVFEG
Sbjct: 414 EDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEG 473

Query: 367 ERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
           ER MTKDN+ LGKF+LTG+PPAPRGVPQIEVTF+ID NGIL+V
Sbjct: 474 ERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHV 516


>M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C.
           elegans BiP (hsp3)gene, complete cds. ).
          Length = 661

 Score =  177 bits (431), Expect = 4e-45
 Identities = 89/163 (54%), Positives = 109/163 (66%)
 Frame = +1

Query: 7   MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 186
           + K  +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE           ++ G+  
Sbjct: 356 LKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE-- 413

Query: 187 EEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEG 366
           E+  +           GIET GGVMT LI RN              +DNQP V IQVFEG
Sbjct: 414 EDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEG 473

Query: 367 ERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
           ER MTKDN+ LGKF+LTG+PPAPRGVPQIEVTF+ID NGIL+V
Sbjct: 474 ERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHV 516


>AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock
           protein protein 4 protein.
          Length = 657

 Score =  163 bits (397), Expect = 5e-41
 Identities = 84/165 (50%), Positives = 103/165 (62%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
           A M K  +H+IVLVGGSTRIPKVQ+L++D+FNGKE ++ INPDE           ++ G 
Sbjct: 351 ADMKKTDVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG- 409

Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
             E   D           GIET GGVMT LI RN              +D+Q  V I ++
Sbjct: 410 -VENTGDVVLLDVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIY 468

Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
           EGER M  DN+ LG F++TGIPPAPRGVPQIEVTF+ID NGIL+V
Sbjct: 469 EGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHV 513


>U88315-3|AAB42371.1|  657|Caenorhabditis elegans Heat shock protein
           protein 6 protein.
          Length = 657

 Score =  146 bits (354), Expect = 8e-36
 Identities = 79/165 (47%), Positives = 99/165 (60%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
           A++  +QI D++LVGG +R+PKVQ  +Q+ F GK  +K++NPDE           +L GD
Sbjct: 352 AEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGD 410

Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
               V D           GIET GG+MT LI RN              +D Q  V I+VF
Sbjct: 411 ----VTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVF 466

Query: 361 EGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 495
           +GER M   N LLG+F L GIPPAPRGVPQ+EVTFDIDANGI+NV
Sbjct: 467 QGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNV 511


>M28528-1|AAA28076.1|  288|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 4 gene, 3' end. ).
          Length = 288

 Score =  136 bits (330), Expect = 7e-33
 Identities = 71/146 (48%), Positives = 88/146 (60%)
 Frame = +1

Query: 58  IPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXG 237
           IPKVQ+L++D+FNGKE ++ INPDE           ++ G   E   D           G
Sbjct: 1   IPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLG 58

Query: 238 IETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELT 417
           IET GGVMT LI RN              +D+Q  V I ++EGER M  DN+ LG F++T
Sbjct: 59  IETVGGVMTKLIGRNTVIPTKKSQVFPTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVT 118

Query: 418 GIPPAPRGVPQIEVTFDIDANGILNV 495
           GIPPAPRGVPQIEVTF+ID NGIL+V
Sbjct: 119 GIPPAPRGVPQIEVTFEIDVNGILHV 144


>X07678-1|CAA30525.1|  487|Caenorhabditis elegans hsp6F protein.
          Length = 487

 Score = 97.5 bits (232), Expect = 5e-21
 Identities = 57/141 (40%), Positives = 75/141 (53%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGD 180
           A++  +QI D++LVGG +R+PKVQ  +Q+ F GK  +K++NPDE           +L GD
Sbjct: 352 AEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGD 410

Query: 181 KSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVF 360
               V D           GIET GG+MT LI RN              +D Q  V I+VF
Sbjct: 411 ----VTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVF 466

Query: 361 EGERAMTKDNNLLGKFELTGI 423
           +GER M   N LLG+F L GI
Sbjct: 467 QGEREMATSNKLLGQFSLVGI 487


>Z81113-10|CAB54300.1|  607|Caenorhabditis elegans Hypothetical
           protein F11F1.1 protein.
          Length = 607

 Score = 90.6 bits (215), Expect = 6e-19
 Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXXXXXXXXXXILHG 177
           A + K+QI++IVLVGGSTRIP ++ ++ Q F +   + +SI+PDE           +L G
Sbjct: 321 ANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSG 380

Query: 178 DKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQV 357
             +EEVQD           G++     M+ LIK+                D Q  + + V
Sbjct: 381 --AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQTSINVPV 438

Query: 358 FEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIL 489
           +EGER +   N  LG+  L  I P  RG   +++T ++D NGIL
Sbjct: 439 YEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEVDYNGIL 481


>Z81059-7|CAB54217.1|  607|Caenorhabditis elegans Hypothetical
           protein F11F1.1 protein.
          Length = 607

 Score = 90.6 bits (215), Expect = 6e-19
 Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXXXXXXXXXXILHG 177
           A + K+QI++IVLVGGSTRIP ++ ++ Q F +   + +SI+PDE           +L G
Sbjct: 321 ANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSG 380

Query: 178 DKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQV 357
             +EEVQD           G++     M+ LIK+                D Q  + + V
Sbjct: 381 --AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTFINSDDFQTSINVPV 438

Query: 358 FEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIL 489
           +EGER +   N  LG+  L  I P  RG   +++T ++D NGIL
Sbjct: 439 YEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEVDYNGIL 481


>Z49967-2|CAA90248.2|  450|Caenorhabditis elegans Hypothetical
           protein F54C9.2 protein.
          Length = 450

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 19/43 (44%), Positives = 30/43 (69%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 129
           A +D A + +IVLVGGST++P V+K++  FF  K  N  ++P+
Sbjct: 356 ANLDTADVDEIVLVGGSTQVPAVRKIVGRFFK-KSANYGVDPE 397


>U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical
           protein T24H7.2 protein.
          Length = 925

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 22  IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 132
           I   VL+G  TR+PKVQ+++Q     KE+ K +N DE
Sbjct: 366 IDQFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDE 402


>L09634-1|AAA27967.1|  776|Caenorhabditis elegans Hypothetical
           protein C30C11.4 protein.
          Length = 776

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 17/38 (44%), Positives = 29/38 (76%)
 Frame = +1

Query: 19  QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 132
           +I +I +VGGS+RIP ++++++D F GKE   ++N DE
Sbjct: 337 EIDEIEIVGGSSRIPMIREIVKDLF-GKEPKTTMNQDE 373


>Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical
           protein T14G8.3b protein.
          Length = 905

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 132
           A++    I  +VL+G  TR+PKV+++L+     KE++  +N DE
Sbjct: 346 AQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 389


>Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical
           protein T14G8.3a protein.
          Length = 921

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = +1

Query: 1   AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 132
           A++    I  +VL+G  TR+PKV+++L+     KE++  +N DE
Sbjct: 362 AQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 405


>Z92849-8|CAB07427.3|  523|Caenorhabditis elegans Hypothetical
           protein H12D21.10 protein.
          Length = 523

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 22/59 (37%), Positives = 30/59 (50%)
 Frame = -3

Query: 207 QQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEILQELLHLGDTSGATHQYN 31
           Q ILH L  +    + L+   I   L R   F ++L+IKEIL+ L HL + S     YN
Sbjct: 327 QFILHRLG-IRQPKADLEKARIVI-LSRSTAFRKILNIKEILRSLGHLPNVSTRVVDYN 383


>U29097-9|AAA68416.2|  343|Caenorhabditis elegans Hypothetical
           protein F18C5.7 protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 404 LPSKLLSLVIARSPSNTW 351
           +P+K+L+L I RSPS  W
Sbjct: 26  IPTKMLALQIQRSPSTIW 43


>AF125450-4|AAD12818.1|  343|Caenorhabditis elegans Hypothetical
           protein Y39F10A.4 protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 404 LPSKLLSLVIARSPSNTW 351
           +P+K+L+L I RSPS  W
Sbjct: 26  IPTKMLALQIQRSPSTIW 43


>AF016682-7|AAB66191.2|  343|Caenorhabditis elegans Hypothetical
           protein T07D3.8 protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 404 LPSKLLSLVIARSPSNTW 351
           +P+K+L+L I RSPS  W
Sbjct: 26  IPTKMLALQIQRSPSTIW 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.138    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,636,120
Number of Sequences: 27780
Number of extensions: 223583
Number of successful extensions: 505
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)

- SilkBase 1999-2023 -