Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328C05f
(341 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein. 33 0.23
AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein. 33 0.23
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 32 0.41
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 32 0.41
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 32 0.41
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 32 0.41
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 32 0.41
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 32 0.54
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 32 0.54
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 32 0.54
U46165-1|AAB17064.1| 308|Homo sapiens Rad GTPase protein. 31 0.71
L24564-1|AAA36540.1| 308|Homo sapiens Rad protein. 31 0.71
BC057815-1|AAH57815.1| 308|Homo sapiens Ras-related associated ... 31 0.71
BC011645-1|AAH11645.1| 308|Homo sapiens Ras-related associated ... 31 0.71
AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor, argini... 31 0.71
X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein. 31 0.94
D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein. 30 1.6
AK057427-1|BAB71481.1| 123|Homo sapiens protein ( Homo sapiens ... 30 1.6
AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein. 30 1.6
Z98882-1|CAI95591.1| 756|Homo sapiens RAB11 family interacting ... 30 2.2
Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein. 30 2.2
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt... 30 2.2
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro... 30 2.2
BC051360-1|AAH51360.1| 756|Homo sapiens RAB11 family interactin... 30 2.2
AL049542-2|CAI95788.1| 756|Homo sapiens RAB11 family interactin... 30 2.2
AL023881-6|CAI95593.1| 756|Homo sapiens RAB11 family interactin... 30 2.2
AF395731-1|AAL12940.1| 756|Homo sapiens eferin protein. 30 2.2
AE006463-12|AAK61232.1| 756|Homo sapiens unknown function protein. 30 2.2
AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein. 30 2.2
AB014565-1|BAA31640.2| 760|Homo sapiens KIAA0665 protein protein. 30 2.2
AB014527-1|BAA31602.1| 1324|Homo sapiens KIAA0627 protein protein. 30 2.2
BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (S... 29 3.8
AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple ... 29 3.8
AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple ... 29 3.8
AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple ... 29 3.8
X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein. 29 5.0
AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein. 29 5.0
U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein. 28 6.6
M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein. 28 6.6
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 28 6.6
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 28 6.6
CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein. 28 6.6
BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor... 28 6.6
X71488-1|CAA50589.1| 264|Homo sapiens Brn-3b protein. 28 8.7
BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (P... 28 8.7
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 28 8.7
BC033213-1|AAH33213.1| 496|Homo sapiens SAMD11 protein protein. 28 8.7
BC024295-1|AAH24295.1| 480|Homo sapiens SAMD11 protein protein. 28 8.7
BC013882-1|AAH13882.2| 583|Homo sapiens EYA2 protein protein. 28 8.7
AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple ... 28 8.7
AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein. 28 8.7
AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein. 28 8.7
AL645608-5|CAI15563.3| 540|Homo sapiens sterile alpha motif dom... 28 8.7
AL645608-4|CAI15564.3| 588|Homo sapiens sterile alpha motif dom... 28 8.7
AL645608-3|CAM12827.2| 681|Homo sapiens sterile alpha motif dom... 28 8.7
AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens ... 28 8.7
AK054643-1|BAB70781.1| 529|Homo sapiens protein ( Homo sapiens ... 28 8.7
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 28 8.7
AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein. 28 8.7
AB067471-1|BAB67777.1| 946|Homo sapiens KIAA1884 protein protein. 28 8.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 28 8.7
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 28 8.7
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 28 8.7
>AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.
Length = 1538
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -1
Query: 338 PVTPPGRVRAV---SRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSR 168
PVTP R+ S+ T R G AR++R P+P+ C R+ S P+R
Sbjct: 709 PVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 768
>AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein.
Length = 1289
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -1
Query: 338 PVTPPGRVRAV---SRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSR 168
PVTP R+ S+ T R G AR++R P+P+ C R+ S P+R
Sbjct: 460 PVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 519
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -3
Query: 336 GHPSGAGQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 226
G P G Q HQ HH+GP P R EK S SE +A
Sbjct: 239 GEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -3
Query: 336 GHPSGAGQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 226
G P G Q HQ HH+GP P R EK S SE +A
Sbjct: 239 GEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -3
Query: 336 GHPSGAGQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 226
G P G Q HQ HH+GP P R EK S SE +A
Sbjct: 239 GEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -3
Query: 336 GHPSGAGQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 226
G P G Q HQ HH+GP P R EK S SE +A
Sbjct: 166 GEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 207
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -3
Query: 336 GHPSGAGQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 226
G P G Q HQ HH+GP P R EK S SE +A
Sbjct: 239 GEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 332 TPPGRVRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSR 168
TPP A R ++ E RR + ++R P+ ++ RS +PR RNK +
Sbjct: 363 TPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDK 417
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 332 TPPGRVRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSR 168
TPP A R ++ E RR + ++R P+ ++ RS +PR RNK +
Sbjct: 363 TPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDK 417
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 332 TPPGRVRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSR 168
TPP A R ++ E RR + ++R P+ ++ RS +PR RNK +
Sbjct: 363 TPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDK 417
>U46165-1|AAB17064.1| 308|Homo sapiens Rad GTPase protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 339 AGHPSGAGQSREQGHQDHHRGPA-PRHSEKHSASEADRAERLLPGALRDA 193
AG G GQ RE+ GPA P H E D L PGAL A
Sbjct: 10 AGGSRGGGQERERRRGSTPWGPAPPLHRRSMPVDERDLQAALTPGALTAA 59
>L24564-1|AAA36540.1| 308|Homo sapiens Rad protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 339 AGHPSGAGQSREQGHQDHHRGPA-PRHSEKHSASEADRAERLLPGALRDA 193
AG G GQ RE+ GPA P H E D L PGAL A
Sbjct: 10 AGGSRGGGQERERRRGSTPWGPAPPLHRRSMPVDERDLQAALTPGALTAA 59
>BC057815-1|AAH57815.1| 308|Homo sapiens Ras-related associated
with diabetes protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 339 AGHPSGAGQSREQGHQDHHRGPA-PRHSEKHSASEADRAERLLPGALRDA 193
AG G GQ RE+ GPA P H E D L PGAL A
Sbjct: 10 AGGSRGGGQERERRRGSTPWGPAPPLHRRSMPVDERDLQAALTPGALTAA 59
>BC011645-1|AAH11645.1| 308|Homo sapiens Ras-related associated
with diabetes protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 339 AGHPSGAGQSREQGHQDHHRGPA-PRHSEKHSASEADRAERLLPGALRDA 193
AG G GQ RE+ GPA P H E D L PGAL A
Sbjct: 10 AGGSRGGGQERERRRGSTPWGPAPPLHRRSMPVDERDLQAALTPGALTAA 59
>AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor,
arginine/serine-rich 12 variant protein.
Length = 206
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 332 TPPGRVRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNK 177
TPP A R ++ E RR + ++R P+ ++ RS +PR RNK
Sbjct: 154 TPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNK 205
>X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein.
Length = 223
Score = 31.1 bits (67), Expect = 0.94
Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = -1
Query: 332 TPPGRVRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 153
TPP V + R + R PG A RRP P R+ R R PS W R
Sbjct: 31 TPPRSVPRLRPRHRHPQDPRSPGPAPRHRRP-PRPDPRAPPARASYRRFRTWPSATSWER 89
Query: 152 R--SPHH 138
R SP H
Sbjct: 90 RRLSPGH 96
>D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 141 VWTPSRPNRSRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLC 284
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>AK057427-1|BAB71481.1| 123|Homo sapiens protein ( Homo sapiens
cDNA FLJ32865 fis, clone TESTI2003649, weakly similar to
GLYCOPROTEIN X PRECURSOR. ).
Length = 123
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 326 PGRVRAVS--RDIRTTTEARRPGTARNTRRPKPTELSAC 216
P R R+V+ R TTT A RPG A R + +SAC
Sbjct: 22 PARTRSVTATRTSWTTTAASRPGPAAGRARSPASTISAC 60
>AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 141 VWTPSRPNRSRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLC 284
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>Z98882-1|CAI95591.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 270 APGLCGGPDVPAHGSDPPRRGDR 338
APGL GGP P + PPR G R
Sbjct: 75 APGLEGGPRDPGPSAPPPRSGPR 97
>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 290 TTTEARRPGTARNTRRPKP---TELSACCRERSETPRHRNKPSRP 165
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
factor-beta-binding protein-2 protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 290 TTTEARRPGTARNTRRPKP---TELSACCRERSETPRHRNKPSRP 165
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
factor beta binding protein 2 protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 290 TTTEARRPGTARNTRRPKP---TELSACCRERSETPRHRNKPSRP 165
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>BC051360-1|AAH51360.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 270 APGLCGGPDVPAHGSDPPRRGDR 338
APGL GGP P + PPR G R
Sbjct: 75 APGLEGGPRDPGPSAPPPRSGPR 97
>AL049542-2|CAI95788.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 270 APGLCGGPDVPAHGSDPPRRGDR 338
APGL GGP P + PPR G R
Sbjct: 75 APGLEGGPRDPGPSAPPPRSGPR 97
>AL023881-6|CAI95593.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 270 APGLCGGPDVPAHGSDPPRRGDR 338
APGL GGP P + PPR G R
Sbjct: 75 APGLEGGPRDPGPSAPPPRSGPR 97
>AF395731-1|AAL12940.1| 756|Homo sapiens eferin protein.
Length = 756
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 270 APGLCGGPDVPAHGSDPPRRGDR 338
APGL GGP P + PPR G R
Sbjct: 75 APGLEGGPRDPGPSAPPPRSGPR 97
>AE006463-12|AAK61232.1| 756|Homo sapiens unknown function protein.
Length = 756
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 270 APGLCGGPDVPAHGSDPPRRGDR 338
APGL GGP P + PPR G R
Sbjct: 75 APGLEGGPRDPGPSAPPPRSGPR 97
>AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein.
Length = 969
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 290 TTTEARRPGTARNTRRPKP---TELSACCRERSETPRHRNKPSRP 165
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>AB014565-1|BAA31640.2| 760|Homo sapiens KIAA0665 protein protein.
Length = 760
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 270 APGLCGGPDVPAHGSDPPRRGDR 338
APGL GGP P + PPR G R
Sbjct: 79 APGLEGGPRDPGPSAPPPRSGPR 101
>AB014527-1|BAA31602.1| 1324|Homo sapiens KIAA0627 protein protein.
Length = 1324
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -1
Query: 272 RPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHH 138
R AR++R P+P+ C RE S P R S HH
Sbjct: 540 RLSVARSSRIPRPSVSQGCSREASRESSRDTSPVRSFQPLASRHH 584
>BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 556
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 340 RRSPLRGGSEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQ 200
R+ +R + AG GPPQ+P +QR+ S + A+A +A+
Sbjct: 21 RKPGMRPDWKAGAGPGGPPQKPAPSSQRKPPARPSAAAAAIAVAAAE 67
>AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple
domains protein 1 short form protein.
Length = 3389
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 273 PGLCGGPDVPAHGS 314
PG CG P PAHGS
Sbjct: 2861 PGFCGDPGTPAHGS 2874
>AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple
domains 1 protein protein.
Length = 3566
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 273 PGLCGGPDVPAHGS 314
PG CG P PAHGS
Sbjct: 2919 PGFCGDPGTPAHGS 2932
>AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple
domains 1 variant protein.
Length = 2966
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 273 PGLCGGPDVPAHGS 314
PG CG P PAHGS
Sbjct: 2334 PGFCGDPGTPAHGS 2347
>X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein.
Length = 341
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 275 RRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 144
RRP T TRRP+ T C RS T PV RR P
Sbjct: 173 RRPRTRTRTRRPR-TWPPRTCSSRSRTAARPPCTCSPVTPRRRP 215
>AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein.
Length = 521
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 304 AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQ 200
AG GPPQ+P +QR+ S + A+A +A+
Sbjct: 9 AGPGGPPQKPAPSSQRKPPARPSAAAAAIAVAAAE 43
>U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein.
Length = 866
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 285 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 160
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein.
Length = 625
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 270 APGLCGGPDVPAHGSDPPRRGDR 338
APGL G P +P DP RG R
Sbjct: 507 APGLKGSPGLPGPRGDPGERGPR 529
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 270 APGLCGGPDVPAHGSDPPRRGDR 338
APGL G P +P DP RG R
Sbjct: 1321 APGLKGSPGLPGPRGDPGERGPR 1343
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 270 APGLCGGPDVPAHGSDPPRRGDR 338
APGL G P +P DP RG R
Sbjct: 1321 APGLKGSPGLPGPRGDPGERGPR 1343
>CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein.
Length = 866
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 285 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 160
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor A
protein.
Length = 866
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 285 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 160
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>X71488-1|CAA50589.1| 264|Homo sapiens Brn-3b protein.
Length = 264
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 333 HPSGAGQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPG 208
HPS + H HH H + H A E + E L PG
Sbjct: 19 HPSALAGTHHHHHHHHH------HHQPHQALEGELLEHLSPG 54
>BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (POZ)
domain containing 5 protein.
Length = 621
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 315 QSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 196
+ +++G A + + K A E + AER+LPG L D
Sbjct: 269 RKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 314 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP--RHRNKPSRPVWSRRSP 144
R SR R+ + R +R + R + S C +++S+TP R R+ S+P R+P
Sbjct: 753 RISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTP 811
>BC033213-1|AAH33213.1| 496|Homo sapiens SAMD11 protein protein.
Length = 496
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 327 SGAGQSREQGHQDHHRGPAPRHSEKHSASEADRAERLL 214
S AGQ R+QG H G AP + S E + LL
Sbjct: 77 STAGQRRKQGLAQHREGAAPAAAPSFSERELPQPPPLL 114
>BC024295-1|AAH24295.1| 480|Homo sapiens SAMD11 protein protein.
Length = 480
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 327 SGAGQSREQGHQDHHRGPAPRHSEKHSASEADRAERLL 214
S AGQ R+QG H G AP + S E + LL
Sbjct: 61 STAGQRRKQGLAQHREGAAPAAAPSFSERELPQPPPLL 98
>BC013882-1|AAH13882.2| 583|Homo sapiens EYA2 protein protein.
Length = 583
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = -3
Query: 339 AGHPSGAGQSREQGHQDHHRGPA--PRHSEKHSASEADRAERLLPGALRDAPS 187
AG G G R +G R PR + RA R PG + AP+
Sbjct: 53 AGAEGGPGPGRRRGRSSRRRQQPRQPRRRRQRQRQRQQRARRSQPGLVGPAPA 105
>AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple
domains 2 protein.
Length = 3487
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +3
Query: 219 SAQLCRLR---TPSVSRCAWAP-GLCGGPDVPAHG 311
S ++C L T S+ C+ G+CG P +PAHG
Sbjct: 2810 STRMCGLDGHWTGSLPHCSGTSVGVCGDPGIPAHG 2844
>AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 315 QSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 196
+ +++G A + + K A E + AER+LPG L D
Sbjct: 269 RKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 315 QSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 196
+ +++G A + + K A E + AER+LPG L D
Sbjct: 269 RKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AL645608-5|CAI15563.3| 540|Homo sapiens sterile alpha motif domain
containing 11 protein.
Length = 540
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 327 SGAGQSREQGHQDHHRGPAPRHSEKHSASEADRAERLL 214
S AGQ R+QG H G AP + S E + LL
Sbjct: 88 STAGQRRKQGLAQHREGAAPAAAPSFSERELPQPPPLL 125
>AL645608-4|CAI15564.3| 588|Homo sapiens sterile alpha motif domain
containing 11 protein.
Length = 588
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 327 SGAGQSREQGHQDHHRGPAPRHSEKHSASEADRAERLL 214
S AGQ R+QG H G AP + S E + LL
Sbjct: 169 STAGQRRKQGLAQHREGAAPAAAPSFSERELPQPPPLL 206
>AL645608-3|CAM12827.2| 681|Homo sapiens sterile alpha motif domain
containing 11 protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 327 SGAGQSREQGHQDHHRGPAPRHSEKHSASEADRAERLL 214
S AGQ R+QG H G AP + S E + LL
Sbjct: 262 STAGQRRKQGLAQHREGAAPAAAPSFSERELPQPPPLL 299
>AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ32015 fis, clone NTONG1000052, weakly similar to
Rattus norvegicus mRNA for Kelch related protein 1. ).
Length = 472
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 315 QSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 196
+ +++G A + + K A E + AER+LPG L D
Sbjct: 269 RKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AK054643-1|BAB70781.1| 529|Homo sapiens protein ( Homo sapiens
cDNA FLJ30081 fis, clone BGGI12000693, weakly similar to
POLYHOMEOTIC-PROXIMAL CHROMATIN PROTEIN. ).
Length = 529
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 327 SGAGQSREQGHQDHHRGPAPRHSEKHSASEADRAERLL 214
S AGQ R+QG H G AP + S E + LL
Sbjct: 77 STAGQRRKQGLAQHREGAAPAAAPSFSERELPQPPPLL 114
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 314 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP--RHRNKPSRPVWSRRSP 144
R SR R+ + R +R + R + S C +++S+TP R R+ S+P R+P
Sbjct: 753 RISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTP 811
>AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.
Length = 3631
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +3
Query: 219 SAQLCRLR---TPSVSRCAWAP-GLCGGPDVPAHG 311
S ++C L T S+ C+ G+CG P +PAHG
Sbjct: 2954 STRMCGLDGHWTGSLPHCSGTSVGVCGDPGIPAHG 2988
>AB067471-1|BAB67777.1| 946|Homo sapiens KIAA1884 protein protein.
Length = 946
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +3
Query: 219 SAQLCRLR---TPSVSRCAWAP-GLCGGPDVPAHG 311
S ++C L T S+ C+ G+CG P +PAHG
Sbjct: 269 STRMCGLDGHWTGSLPHCSGTSVGVCGDPGIPAHG 303
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 314 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP--RHRNKPSRPVWSRRSP 144
R SR R+ + R +R + R + S C +++S+TP R R+ S+P R+P
Sbjct: 753 RISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTP 811
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 314 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP--RHRNKPSRPVWSRRSP 144
R SR R+ + R +R + R + S C +++S+TP R R+ S+P R+P
Sbjct: 718 RISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTP 776
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 314 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP--RHRNKPSRPVWSRRSP 144
R SR R+ + R +R + R + S C +++S+TP R R+ S+P R+P
Sbjct: 543 RISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTP 601
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,659,377
Number of Sequences: 237096
Number of extensions: 1291012
Number of successful extensions: 6496
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 5290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6489
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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