Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328C04f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020870-1|AAH20870.1| 649|Homo sapiens fibronectin leucine ric... 32 1.4
AY358319-1|AAQ88685.1| 649|Homo sapiens FLRT3 protein. 32 1.4
AL132826-1|CAB86687.1| 649|Homo sapiens fibronectin leucine ric... 32 1.4
AK074909-1|BAC11284.1| 649|Homo sapiens protein ( Homo sapiens ... 32 1.4
AK074883-1|BAC11265.1| 627|Homo sapiens protein ( Homo sapiens ... 32 1.4
AK027694-1|BAB55303.1| 623|Homo sapiens protein ( Homo sapiens ... 32 1.4
AK027297-1|BAB55023.1| 649|Homo sapiens protein ( Homo sapiens ... 32 1.4
AF169677-1|AAF28461.1| 649|Homo sapiens leucine-rich repeat tra... 32 1.4
AB040902-1|BAA95993.1| 662|Homo sapiens KIAA1469 protein protein. 32 1.4
AC002483-1|AAC35295.1| 1849|Homo sapiens WUGSC:H_248O15.1 protein. 31 3.2
>BC020870-1|AAH20870.1| 649|Homo sapiens fibronectin leucine rich
transmembrane protein 3 protein.
Length = 649
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 185 PGIPVQYLYLIDNLMLRMPPEGFQYLYRL 271
PG ++ LYL DN + R+PP F YL +L
Sbjct: 245 PGTNLRKLYLQDNHINRVPPNAFSYLRQL 273
>AY358319-1|AAQ88685.1| 649|Homo sapiens FLRT3 protein.
Length = 649
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 185 PGIPVQYLYLIDNLMLRMPPEGFQYLYRL 271
PG ++ LYL DN + R+PP F YL +L
Sbjct: 245 PGTNLRKLYLQDNHINRVPPNAFSYLRQL 273
>AL132826-1|CAB86687.1| 649|Homo sapiens fibronectin leucine rich
transmembrane protein 3 protein.
Length = 649
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 185 PGIPVQYLYLIDNLMLRMPPEGFQYLYRL 271
PG ++ LYL DN + R+PP F YL +L
Sbjct: 245 PGTNLRKLYLQDNHINRVPPNAFSYLRQL 273
>AK074909-1|BAC11284.1| 649|Homo sapiens protein ( Homo sapiens
cDNA FLJ90428 fis, clone NT2RP3000616, highly similar to
Leucine-rich repeat transmembrane protein FLRT3
precursor. ).
Length = 649
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 185 PGIPVQYLYLIDNLMLRMPPEGFQYLYRL 271
PG ++ LYL DN + R+PP F YL +L
Sbjct: 245 PGTNLRKLYLQDNHINRVPPNAFSYLRQL 273
>AK074883-1|BAC11265.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ90402 fis, clone NT2RP2006004, highly similar to
Leucine-rich repeat transmembrane protein FLRT3
precursor. ).
Length = 627
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 185 PGIPVQYLYLIDNLMLRMPPEGFQYLYRL 271
PG ++ LYL DN + R+PP F YL +L
Sbjct: 245 PGTNLRKLYLQDNHINRVPPNAFSYLRQL 273
>AK027694-1|BAB55303.1| 623|Homo sapiens protein ( Homo sapiens
cDNA FLJ14788 fis, clone NT2RP4000925, weakly similar to
FIBROMODULIN PRECURSOR. ).
Length = 623
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 185 PGIPVQYLYLIDNLMLRMPPEGFQYLYRL 271
PG ++ LYL DN + R+PP F YL +L
Sbjct: 219 PGTNLRKLYLQDNHINRVPPNAFSYLRQL 247
>AK027297-1|BAB55023.1| 649|Homo sapiens protein ( Homo sapiens
cDNA FLJ14391 fis, clone HEMBA1003077, weakly similar to
SLIT PROTEIN PRECURSOR. ).
Length = 649
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 185 PGIPVQYLYLIDNLMLRMPPEGFQYLYRL 271
PG ++ LYL DN + R+PP F YL +L
Sbjct: 245 PGTNLRKLYLQDNHINRVPPNAFSYLRQL 273
>AF169677-1|AAF28461.1| 649|Homo sapiens leucine-rich repeat
transmembrane protein FLRT3 protein.
Length = 649
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 185 PGIPVQYLYLIDNLMLRMPPEGFQYLYRL 271
PG ++ LYL DN + R+PP F YL +L
Sbjct: 245 PGTNLRKLYLQDNHINRVPPNAFSYLRQL 273
>AB040902-1|BAA95993.1| 662|Homo sapiens KIAA1469 protein protein.
Length = 662
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 185 PGIPVQYLYLIDNLMLRMPPEGFQYLYRL 271
PG ++ LYL DN + R+PP F YL +L
Sbjct: 258 PGTNLRKLYLQDNHINRVPPNAFSYLRQL 286
>AC002483-1|AAC35295.1| 1849|Homo sapiens WUGSC:H_248O15.1 protein.
Length = 1849
Score = 30.7 bits (66), Expect = 3.2
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 346 LLQTEFSLKSY*TLSFTNGVYFNYSQSIEILKALRRHPQHKVVNQIQI 203
LLQ +SL SY LS FN +E+LK + ++ QH +++I+I
Sbjct: 1646 LLQVIYSLLSYMDLSVVPVKQFN----VEVLKTIEKYVQHSDLSKIEI 1689
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,607,652
Number of Sequences: 237096
Number of extensions: 1118626
Number of successful extensions: 1439
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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