Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328C04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113300-1|AAM29305.1|  297|Drosophila melanogaster AT26020p pro...    29   5.1  
AY052140-1|AAK93564.1|  592|Drosophila melanogaster SD09786p pro...    29   5.1  
AE013599-2425|AAF57898.2|  592|Drosophila melanogaster CG30456-P...    29   5.1  
AY058271-1|AAL13500.1|  982|Drosophila melanogaster GH02475p pro...    28   6.7  
AE014134-1562|AAF52710.1|  982|Drosophila melanogaster CG9466-PA...    28   6.7  

>AY113300-1|AAM29305.1|  297|Drosophila melanogaster AT26020p
           protein.
          Length = 297

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -2

Query: 289 VYFNYSQSIEILKALRRHPQHKVVNQIQILNRYPRLYTV*IPTYFSEYELTFK 131
           +Y NY  SI + +  +      +V  IQ + RYP L T  I T+F   ++  K
Sbjct: 44  LYKNYFTSIRLERDDKLGINSFLVQPIQRMARYPLLLTQFINTFFKNRDIVMK 96


>AY052140-1|AAK93564.1|  592|Drosophila melanogaster SD09786p
           protein.
          Length = 592

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -2

Query: 289 VYFNYSQSIEILKALRRHPQHKVVNQIQILNRYPRLYTV*IPTYFSEYELTFK 131
           +Y NY  SI + +  +      +V  IQ + RYP L T  I T+F   ++  K
Sbjct: 339 LYKNYFTSIRLERDDKLGINSFLVQPIQRMARYPLLLTQFINTFFKNRDIVMK 391


>AE013599-2425|AAF57898.2|  592|Drosophila melanogaster CG30456-PA
           protein.
          Length = 592

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -2

Query: 289 VYFNYSQSIEILKALRRHPQHKVVNQIQILNRYPRLYTV*IPTYFSEYELTFK 131
           +Y NY  SI + +  +      +V  IQ + RYP L T  I T+F   ++  K
Sbjct: 339 LYKNYFTSIRLERDDKLGINSFLVQPIQRMARYPLLLTQFINTFFKNRDIVMK 391


>AY058271-1|AAL13500.1|  982|Drosophila melanogaster GH02475p
           protein.
          Length = 982

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 21/70 (30%), Positives = 28/70 (40%)
 Frame = -2

Query: 436 LRESEYSGIKYNIIYSLQTSCLVMRFYNMTLLQTEFSLKSY*TLSFTNGVYFNYSQSIEI 257
           + E + SG KYNIIYS  T C +   +         +L  +   S TN  +  Y  S   
Sbjct: 310 VNERQSSGSKYNIIYSTPT-CYLNSVHKSVQSYPNKTLDFFPYGSDTNSFWTGYYTSRPT 368

Query: 256 LKALRRHPQH 227
            K   R   H
Sbjct: 369 QKRFERDGNH 378


>AE014134-1562|AAF52710.1|  982|Drosophila melanogaster CG9466-PA
           protein.
          Length = 982

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 21/70 (30%), Positives = 28/70 (40%)
 Frame = -2

Query: 436 LRESEYSGIKYNIIYSLQTSCLVMRFYNMTLLQTEFSLKSY*TLSFTNGVYFNYSQSIEI 257
           + E + SG KYNIIYS  T C +   +         +L  +   S TN  +  Y  S   
Sbjct: 310 VNERQSSGSKYNIIYSTPT-CYLNSVHKSVQSYPNKTLDFFPYGSDTNSFWTGYYTSRPT 368

Query: 256 LKALRRHPQH 227
            K   R   H
Sbjct: 369 QKRFERDGNH 378


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,793,520
Number of Sequences: 53049
Number of extensions: 308585
Number of successful extensions: 511
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)