Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328C04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.7  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 78  AQKQIQ*VSNYKTRNGVKLHG 16
           AQ+Q+Q V NY      K HG
Sbjct: 707 AQQQVQAVRNYYANLYTKYHG 727


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 212 LIDNLMLRMPPEG 250
           LIDN M  MPP G
Sbjct: 326 LIDNWMTYMPPSG 338


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 212 LIDNLMLRMPPEG 250
           L+DN M  MPP G
Sbjct: 326 LVDNWMTYMPPSG 338


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 132 LKVNSYSEKYVGIYTVYSLGYLF 200
           L  +S S+  VG Y V  +GY F
Sbjct: 246 LDPSSDSQNEVGFYEVEGIGYDF 268


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,128
Number of Sequences: 438
Number of extensions: 2362
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)