Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328C01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p pro...   189   2e-48
AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal pr...   189   2e-48
AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC...   189   2e-48
AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB...   189   2e-48
AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA...   189   2e-48
X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal prot...   189   2e-48
AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p pro...   161   7e-40
AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB...   161   7e-40
AY061282-1|AAL28830.1|  378|Drosophila melanogaster LD20087p pro...    28   8.8  
AE014134-264|AAF51367.2|  378|Drosophila melanogaster CG7420-PA ...    28   8.8  

>AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p
           protein.
          Length = 156

 Score =  189 bits (461), Expect = 2e-48
 Identities = 86/121 (71%), Positives = 102/121 (84%)
 Frame = -3

Query: 465 IVKTVAAHLKKTGKVKVPEHMDFVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVK 286
           + K VA  LKKTGK+KVP+ MD VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV 
Sbjct: 14  VTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVG 73

Query: 285 TVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 106
           ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RDLDR
Sbjct: 74  SITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDR 133

Query: 105 I 103
           I
Sbjct: 134 I 134


>AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal
           protein S19 protein.
          Length = 156

 Score =  189 bits (461), Expect = 2e-48
 Identities = 86/121 (71%), Positives = 102/121 (84%)
 Frame = -3

Query: 465 IVKTVAAHLKKTGKVKVPEHMDFVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVK 286
           + K VA  LKKTGK+KVP+ MD VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV 
Sbjct: 14  VTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVG 73

Query: 285 TVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 106
           ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RDLDR
Sbjct: 74  SITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDR 133

Query: 105 I 103
           I
Sbjct: 134 I 134


>AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC,
           isoform C protein.
          Length = 156

 Score =  189 bits (461), Expect = 2e-48
 Identities = 86/121 (71%), Positives = 102/121 (84%)
 Frame = -3

Query: 465 IVKTVAAHLKKTGKVKVPEHMDFVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVK 286
           + K VA  LKKTGK+KVP+ MD VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV 
Sbjct: 14  VTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVG 73

Query: 285 TVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 106
           ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RDLDR
Sbjct: 74  SITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDR 133

Query: 105 I 103
           I
Sbjct: 134 I 134


>AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB,
           isoform B protein.
          Length = 156

 Score =  189 bits (461), Expect = 2e-48
 Identities = 86/121 (71%), Positives = 102/121 (84%)
 Frame = -3

Query: 465 IVKTVAAHLKKTGKVKVPEHMDFVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVK 286
           + K VA  LKKTGK+KVP+ MD VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV 
Sbjct: 14  VTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVG 73

Query: 285 TVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 106
           ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RDLDR
Sbjct: 74  SITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDR 133

Query: 105 I 103
           I
Sbjct: 134 I 134


>AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA,
           isoform A protein.
          Length = 156

 Score =  189 bits (461), Expect = 2e-48
 Identities = 86/121 (71%), Positives = 102/121 (84%)
 Frame = -3

Query: 465 IVKTVAAHLKKTGKVKVPEHMDFVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVK 286
           + K VA  LKKTGK+KVP+ MD VKTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV 
Sbjct: 14  VTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVG 73

Query: 285 TVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 106
           ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RDLDR
Sbjct: 74  SITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDR 133

Query: 105 I 103
           I
Sbjct: 134 I 134


>X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal protein
           S19 protein.
          Length = 156

 Score =  189 bits (460), Expect = 2e-48
 Identities = 85/121 (70%), Positives = 102/121 (84%)
 Frame = -3

Query: 465 IVKTVAAHLKKTGKVKVPEHMDFVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVK 286
           + K VA  LKKTGK+KVP+ MD +KTA+FKELAPYDPDWFYVRCA+ILRH+Y RSP GV 
Sbjct: 14  VTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVG 73

Query: 285 TVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 106
           ++TKI+GGRKRNGV PSHFCR++   ARKALQ+LE  +LVEK  DGGR L++ G+RDLDR
Sbjct: 74  SITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDR 133

Query: 105 I 103
           I
Sbjct: 134 I 134


>AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p
           protein.
          Length = 155

 Score =  161 bits (390), Expect = 7e-40
 Identities = 73/121 (60%), Positives = 91/121 (75%)
 Frame = -3

Query: 465 IVKTVAAHLKKTGKVKVPEHMDFVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVK 286
           + K +AA LKK+GK+ VPE   ++KT +FKE AP D DWFY RCA+I+RH+Y+RSP GV 
Sbjct: 14  LTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVG 73

Query: 285 TVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 106
             TK++ GRKRNGV PS  CRSS    RKALQ+LEA  +VE+  DGGR LT QG+R+LDR
Sbjct: 74  AFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDR 133

Query: 105 I 103
           I
Sbjct: 134 I 134


>AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB
           protein.
          Length = 155

 Score =  161 bits (390), Expect = 7e-40
 Identities = 73/121 (60%), Positives = 91/121 (75%)
 Frame = -3

Query: 465 IVKTVAAHLKKTGKVKVPEHMDFVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVK 286
           + K +AA LKK+GK+ VPE   ++KT +FKE AP D DWFY RCA+I+RH+Y+RSP GV 
Sbjct: 14  LTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVG 73

Query: 285 TVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 106
             TK++ GRKRNGV PS  CRSS    RKALQ+LEA  +VE+  DGGR LT QG+R+LDR
Sbjct: 74  AFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDR 133

Query: 105 I 103
           I
Sbjct: 134 I 134


>AY061282-1|AAL28830.1|  378|Drosophila melanogaster LD20087p
           protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = +3

Query: 69  PAAWPLDEPGQRFCQGLVYLVW*ECDHRPELSQQASM--PPTIAKPCVQYCLMTCRNVKV 242
           P   P +EP QR   GL +      D++  +  +  +  PP I       CL  C  VK+
Sbjct: 139 PVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATCLHRCNTVKI 198

Query: 243 *LH 251
            +H
Sbjct: 199 QVH 201


>AE014134-264|AAF51367.2|  378|Drosophila melanogaster CG7420-PA
           protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = +3

Query: 69  PAAWPLDEPGQRFCQGLVYLVW*ECDHRPELSQQASM--PPTIAKPCVQYCLMTCRNVKV 242
           P   P +EP QR   GL +      D++  +  +  +  PP I       CL  C  VK+
Sbjct: 139 PVKLPREEPAQRISFGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATCLHRCNTVKI 198

Query: 243 *LH 251
            +H
Sbjct: 199 QVH 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,147,142
Number of Sequences: 53049
Number of extensions: 456513
Number of successful extensions: 962
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)