Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328B12f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 30 0.24
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 0.56
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 28 0.97
SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|ch... 27 1.7
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 1.7
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 3.0
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 26 3.0
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 3.9
SPCC4G3.13c |||CUE domain protein Cue1/4 family|Schizosaccharomy... 25 6.8
SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1 ... 25 6.8
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 25 6.8
SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyc... 25 6.8
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 25 6.8
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 25 6.8
SPAC3F10.15c |spo12||Spo12 family protein|Schizosaccharomyces po... 25 6.8
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 25 9.0
SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion ... 25 9.0
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 9.0
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 25 9.0
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 29.9 bits (64), Expect = 0.24
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 68 TTGSSDRRWNHKLLLTRPTLLPGSDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTP 241
T+ SS + + L L + T++P + Q+ T + KQ PH + P + PTP
Sbjct: 228 TSPSSAKEFKQLLTLKQSTIIPRTPQK---TVRSIVKQTSSPHSSKMPKHSLPSSPTP 282
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 28.7 bits (61), Expect = 0.56
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 148 KPFNLPTRQEAAPPATSYGVPDDSYQAPTNT----YGLPQAAPDTEYGVPRDEETTTENA 315
+P NLP + A PAT YG+PD + T G P A ++ P D ++ N
Sbjct: 175 QPHNLPAQ---AQPATIYGIPDALHTTQNGTTIHVTGTPPGAV-SQRSEP-DSRLSSMNE 229
Query: 316 ENLKVEGINEKLEEAPK 366
L +L+ AP+
Sbjct: 230 MQLLASAAANQLDAAPR 246
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 27.9 bits (59), Expect = 0.97
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 214 DSYQAPTNTYGLPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLEEAPKSDAEVVSSQ 393
DSY + N Y P AP T P+ + + + E I+ + E K D +++S Q
Sbjct: 234 DSYNSTNNYYSSPTMAPSTGGAKPKSDLDAPRDVRDSDWELISLR-NELSKLDEKILSLQ 292
>SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 333
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 128 LPGSD--QRSRSTCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQL 262
+PGS QR+ S +KK L L + KHQ Y+KQL
Sbjct: 281 IPGSTTVQRAESNLSALKKSLSSEQLEEAKKVLDKHQIFGLRYNKQL 327
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 466 PDVVLRLELYPLQLRSRQEGCSKSPANSPLRRHFSEPPRV 347
P + R L+PL L +Q+ +SP+ P +++ +PP V
Sbjct: 54 PSHLPRSTLHPL-LSQQQQPAQQSPSLGPAQQNIQQPPSV 92
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 164 PLVKKQLHRPHLTASPTTATKHQPTP 241
P +K Q+ T +PT A KH P P
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPP 746
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 247 LPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLEE 357
LP D + + + E T+N+E L E + EKLEE
Sbjct: 420 LPHVHWDVDPFILKLSEELTQNSETLCKEKLKEKLEE 456
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 178 AAPPATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVP 285
+AP +SYG +D Q N Y LP + T Y P
Sbjct: 163 SAPFLSSYGSSNDPSQERVNEYSLPSNSNST-YTTP 197
>SPCC4G3.13c |||CUE domain protein Cue1/4 family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 215
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 177 SSSTGHILRRPRRQLPSTNQHLXXXXXXXXHRIWCASRRRNYNRKRGKPQ 326
SSSTG+ R R +LPS+ + + A+R+R + +G+ Q
Sbjct: 163 SSSTGNEEVRNRSKLPSSKKEREELFRKRKEEMILAARKRMEGKIKGEKQ 212
>SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 6.8
Identities = 22/72 (30%), Positives = 28/72 (38%)
Frame = +2
Query: 143 QRSRSTCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNMVCLATKKLQPKTRKT 322
+RSR PL+K QL L P A+K + K L Q L L T K
Sbjct: 450 RRSRKDAPLLKSQLLMDSLENLPVRASKDRVRSLEVAKALQDQYQSLLT---LVESTAKR 506
Query: 323 SKLRV*TKNSRR 358
L+ N R+
Sbjct: 507 QLLKCQLSNLRK 518
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 25.0 bits (52), Expect = 6.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +1
Query: 136 FRPAKPFNLPTRQEA---APPATSYGVPDDSYQAPTNTYGLPQAAPDT-EYGV 282
F P P P+ + APPA SY P S+ A G DT +YG+
Sbjct: 318 FVPMYPTTFPSSKPQIVNAPPAPSYFSPGSSFGAQLCANGSTLLRADTKQYGL 370
>SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 529
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +2
Query: 128 LPGSDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPT 268
+ S S+S + + H P LT T + + TP H LPT
Sbjct: 1 MSSSSPSSQSRLSVPGRTPHLPPLTIPHTVSAEGLATPNTPHALLPT 47
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Frame = -3
Query: 150 LRWSEPGRSVGRVSR-----SLWFHLLSLEPVVLPEAGRLSCHDN 31
L+W PGR +G SR S ++S P+ P R S N
Sbjct: 137 LKWESPGRDIGTSSRDSANVSRSSSMMSSHPIPTPAIQRTSSIPN 181
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +1
Query: 232 TNTYGLPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLEEAPKSDAEVVSSQGSYYIP 411
T+ P +AP +PR + + + +GIN ++++ A+ +SQ P
Sbjct: 727 TSNISYPLSAPSDVGSLPRASNSPSRPVMHPNTQGINTEIKDMA---AQFPNSQTGGLTP 783
Query: 412 PAWISAAAGTVP 447
+W +VP
Sbjct: 784 NSWSMNTNVSVP 795
>SPAC3F10.15c |spo12||Spo12 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 90
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +2
Query: 137 SDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNMVCLATKKLQPKTR 316
+D ++S+ + LH+ T KH+ + PT +++ T KLQ +
Sbjct: 6 ADSIAKSSVETTIQPLHQESATLRQQVLQKHELPKHALNVASPTDSLMSPCTAKLQAHKK 65
Query: 317 K 319
K
Sbjct: 66 K 66
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 157 NLPTRQEAAPPATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVPRDEETTTEN 312
NLP++ A P P S Q P N LP A+P++ +P + N
Sbjct: 338 NLPSQNAPARPVE----PSPSIQPP-NLLNLPTASPESTSWLPGSQTNIPAN 384
>SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion
cytochrome c oxidase assembly protein Cox1102,
mitochondrial ribosomal protein
Rsm2202|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 474 PCSLTSFSXWNCTRCS*DPGRRDVVRALRTHHFGVTFRSLLEFFV 340
PC TSFS +NC G R++ R F R+ + + V
Sbjct: 536 PCIFTSFSCYNCI-----SGTRNISRQYSRDKFHYNQRTTIYYLV 575
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/29 (31%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 408 DVVRALRTHHFGVTFRSLLEF-FVYTLNF 325
DV++ +RT + G+ ++L+ + F Y + F
Sbjct: 907 DVIQTIRTRYHGMNCQNLIHYSFSYAIEF 935
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 163 PTRQEAAPPATSYGVP--DDSYQAPTNTYGLPQAAPDTEYGVPRDEETTTEN 312
PT +AP A+ GVP ++S++A ++ +A P+ + T+E+
Sbjct: 293 PTATTSAPSASPTGVPVEEESHKATSDAVPPAEAKPEPVPASAAERAPTSES 344
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.128 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,057,484
Number of Sequences: 5004
Number of extensions: 41910
Number of successful extensions: 136
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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