Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328B12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0084 - 15041261-15041437,15041625-15041765,15042857-150429... 33 0.14
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 33 0.18
04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,999... 32 0.24
09_06_0352 + 22472369-22472731,22472829-22472941,22473420-224742... 31 0.42
03_05_1007 - 29637911-29638333,29640095-29640282,29640688-296407... 31 0.42
08_02_0349 - 16077063-16077824,16077891-16078102,16078142-160782... 31 0.74
01_06_1682 - 39130696-39131705,39132355-39132583 31 0.74
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 30 0.98
05_05_0201 + 23206859-23206998,23207858-23207936,23208121-232082... 30 1.3
11_04_0179 + 14562288-14562860,14562874-14563489,14563529-145636... 29 1.7
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 29 1.7
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 29 3.0
01_06_0541 - 30088910-30089107,30089421-30089477,30089563-300897... 29 3.0
10_08_1059 + 22618999-22619206,22620386-22620416,22620440-226209... 28 4.0
10_05_0082 - 8916831-8917738,8919919-8920108 28 4.0
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 28 4.0
07_03_0582 + 19682875-19683375 28 4.0
07_03_0306 + 16496053-16496400 28 4.0
10_08_1026 + 22400551-22401161,22401437-22401632,22401837-224018... 28 5.2
10_05_0071 - 8801918-8802235,8802335-8802488,8802701-8802938,880... 28 5.2
09_06_0081 + 20745627-20748144,20748211-20748308 28 5.2
07_01_0253 + 1888831-1889399,1890121-1890526,1890980-1891195,189... 28 5.2
06_03_0433 - 20718726-20719895 28 5.2
05_07_0228 - 28526885-28527046,28527151-28527241,28528315-285284... 28 5.2
01_06_0692 + 31276342-31276479,31277161-31277408,31277541-312777... 28 5.2
09_02_0411 + 8721855-8722232 25 5.4
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 27 6.9
03_06_0614 - 35099225-35099461,35099545-35099694,35099919-351000... 27 6.9
03_02_0341 - 7643426-7643973,7644340-7644505 27 6.9
12_01_1022 - 10435409-10435564,10435950-10436219,10436820-104371... 27 9.1
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 27 9.1
09_06_0293 + 22086359-22086496,22086604-22087213,22087407-220879... 27 9.1
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 27 9.1
07_01_0413 - 3155080-3155274,3155628-3155933,3156062-3156163,315... 27 9.1
03_06_0234 - 32535281-32535919,32536121-32536860,32536911-32536953 27 9.1
>02_03_0084 -
15041261-15041437,15041625-15041765,15042857-15042946,
15043111-15043201,15043953-15044155,15045361-15045438,
15045535-15045651,15046111-15046161,15046405-15046500,
15046726-15046742,15046938-15047064,15050585-15050681,
15051565-15051638,15051910-15051993,15052099-15052290,
15054191-15054319,15055607-15055639,15055747-15055843,
15055940-15055990,15057494-15057564,15058305-15058455,
15058625-15058703,15059265-15059346,15060335-15060335,
15060565-15060620,15060969-15061018,15061511-15061580
Length = 834
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +3
Query: 126 SCRVQTSEAVQPAHSSRSSSTGHILRRPR 212
S V+TS A QPAHS RS TG RPR
Sbjct: 633 SSSVRTSPAHQPAHSMRSRRTGGTWARPR 661
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 113 TRP-TLLPGSDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPT 268
T+P ++LPG+ R+ S+ P + PH T A H P+P + ++P+
Sbjct: 2471 TQPQSILPGNMYRAMSSSPFSSTPMPMPHGTYRAAGAQPHAPSPHLQQLRMPS 2523
>04_03_0037 - 9991176-9991268,9991403-9991474,9991569-9991928,
9992466-9992555,9992692-9992782,9993530-9993729,
9998024-9998101,9998196-9998312,10000017-10000112,
10000192-10000317,10000533-10000629,10000979-10001023,
10002106-10002179,10002267-10002350,10002439-10002522,
10002660-10002851,10003775-10003903,10004061-10004093,
10004190-10004286,10004833-10004883,10005211-10005289,
10005480-10005552,10005595-10005691,10006392-10006473,
10008345-10008691,10010271-10010535,10010624-10010743,
10010971-10011358
Length = 1219
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = +3
Query: 114 RALRSCRVQTSEAVQPAHSSRSSSTGHILRRPR 212
R + S QTS A QPA S RS TG RPR
Sbjct: 945 RGIPSASTQTSPAHQPAQSMRSRRTGGTWARPR 977
>09_06_0352 + 22472369-22472731,22472829-22472941,22473420-22474226,
22474314-22474620,22474862-22475027,22475491-22475534,
22476019-22476161,22477900-22477937,22478032-22478129,
22478130-22478220,22478514-22478693,22479311-22479495,
22479583-22479678,22480151-22480297,22480763-22480864,
22480932-22481564
Length = 1170
Score = 31.5 bits (68), Expect = 0.42
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 128 LPGSDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTP 241
L GSDQ + ST + +HR A +T H+PTP
Sbjct: 1054 LVGSDQHANSTTAEAPQVVHRHPTQAKASTQCAHKPTP 1091
>03_05_1007 -
29637911-29638333,29640095-29640282,29640688-29640773,
29641108-29641173,29641289-29641331,29641398-29642328
Length = 578
Score = 31.5 bits (68), Expect = 0.42
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Frame = +1
Query: 190 ATSYGVPDDSYQAPTNTYGLPQAA-PDTEYGVPRDEETTTENA-ENLKVEGINEKLEEAP 363
ATS +P+D A + AA P P ++ + + EG+ E L E
Sbjct: 9 ATSLNIPEDDPGADDDPDSYAAAAAPSPSARNPHPPQSVHPHPPHSAAAEGVKEDLTELS 68
Query: 364 KSDAEVVSSQGSYYIPPAWISAAAGTVPXGERRQ--GTWRTPPVFS 495
K+ ++ PP ++ + + P E R GT +TPP S
Sbjct: 69 KTLTRQFWGVANFLAPPPGETSPSPSPPSAEARYGGGTAQTPPEIS 114
>08_02_0349 -
16077063-16077824,16077891-16078102,16078142-16078204,
16078439-16078865,16078870-16078919,16079006-16079360
Length = 622
Score = 30.7 bits (66), Expect = 0.74
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +1
Query: 157 NLP-TRQEAAPPATSYGVPDDSYQAPTNTYGLPQAAPDTEYG-VPRDEETTTENAENLKV 330
N P TR+EA Y + S P G Q P + G + R +++ EN + + +
Sbjct: 242 NCPETREEAM-----YMGNNSSGYRPQGGQGWNQPHPYYQGGRILRQPDSSVENVKAIMM 296
Query: 331 EG-INEKLEEAPKSDAEVVSSQGSYYIPPAWISAAAGTVPXGERR 462
G IN +EAP SD+ Q +PP + P R+
Sbjct: 297 RGGINRTAKEAPSSDSADKEVQPEKTVPPEYYDTRLLPFPQRSRK 341
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 142 PAKPFNLPTRQEAAPPATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVP 285
P F P+ Q +PP +SY P P N+Y AP T Y P
Sbjct: 216 PFNKFPPPSHQYPSPPQSSYHSPPPYQYTPPNSY----QAPPTSYNHP 259
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +1
Query: 181 APPATSYGVPDDSYQAPTNTYGLPQAAPD 267
APP TSYG P A TYG P PD
Sbjct: 517 APPPTSYGPPSQQPPAYGQTYG-PTTGPD 544
>05_05_0201 +
23206859-23206998,23207858-23207936,23208121-23208219,
23208561-23208674,23208762-23208910,23209010-23209091,
23209170-23209255,23209520-23209750,23209830-23210727
Length = 625
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 142 PAKPFNLPTRQEAAPPATSYGVPDDSYQA-PTNTYGLPQAAPDTEY-GVPRDEETTTENA 315
P+ P+ P RQ+ PAT P Y + + T P A D G PR ETT A
Sbjct: 524 PSSPYAAPPRQQVPSPATK---PMQQYNSFVSQTRSGPAMAQDVRMNGNPRPSETTAAAA 580
Query: 316 E 318
+
Sbjct: 581 K 581
>11_04_0179 +
14562288-14562860,14562874-14563489,14563529-14563658,
14563694-14564540
Length = 721
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 280 VPRDEETTTENAENLKV-EGINEKLEEAPKSDAEVVSSQGSYYIPPAWISAAAGTVPXGE 456
+PR + EN + + EGIN+ +EAP SD+ Q +P + + P
Sbjct: 378 IPRQPGSFLENVKAITTREGINKIAKEAPSSDSADKEDQPEKTVPQEYCDTRLLSFPQRS 437
Query: 457 RR 462
R+
Sbjct: 438 RK 439
>04_04_1079 - 30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 163 PTRQEAAPPATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVPRDEETT 303
P Q +A A+S GVP + T + G+P APD G P+ ++ +
Sbjct: 1174 PVPQASASSASSSGVPAPHAGSSTQSTGVP--APDPTAGAPKKKKVS 1218
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 472 MFPDVVLRLELYPLQLRSRQEGCSKSPANSPLRRHFSEPPRVF 344
MF + + + QL S G S SP++ PL++ PP++F
Sbjct: 221 MFESLGYQSGFFLSQLFSSSRGTSPSPSSFPLKQQQPPPPQLF 263
>01_06_0541 -
30088910-30089107,30089421-30089477,30089563-30089721,
30090639-30090777,30090863-30091247,30091612-30091816
Length = 380
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 172 QEAAPPATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVPRDEETTTENAENLKVE 333
+E+AP A G DD APT + A + E D+E T E E L+ E
Sbjct: 206 EESAPIAEKQGEQDD---APTGEKDNKEGAANEEEEKEEDKEMTLEEFEKLREE 256
>10_08_1059 +
22618999-22619206,22620386-22620416,22620440-22620974,
22621065-22621319
Length = 342
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 133 GFRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPTNT 240
G RPA P +LP+ + A P +S P + +P+ T
Sbjct: 36 GCRPASPLHLPSAESAHRPVSSSIRPTNVQGSPSGT 71
>10_05_0082 - 8916831-8917738,8919919-8920108
Length = 365
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = -3
Query: 219 AVVGDAVRCGRWSCFLTSGQVERLRWSEPG---RSVGRVSRSLW 97
A + +A GRW + G ER W E R VGR R W
Sbjct: 16 ASLAEAAIAGRWEEWEEEGDREREEWVEEADRERGVGRRGRGRW 59
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 159 PAHSSRSSSTGHILRRPRRQLPSTNQHLXXXXXXXXHRI 275
PAH +RS + ++ PR+ +PST++ H++
Sbjct: 87 PAHQARSEAPAPLVHVPRKGMPSTHRSHIAPARSPVHKV 125
>07_03_0582 + 19682875-19683375
Length = 166
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 158 TCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNMVCLATKKLQPKT 313
T + K + P +PT A P PT K LP M L ++L+ K+
Sbjct: 109 TVRVAVKDVKLPAPRPAPTPANMAAPRPTTAGKNLPRLKMFVLEKEQLRAKS 160
>07_03_0306 + 16496053-16496400
Length = 115
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 285 SRRRNYNRKRGKPQS*---GYKRKT-RGGSEK*RRSGEFAGL 398
+RRR R PQ G++ T RGG++ RRSGE AG+
Sbjct: 51 ARRRRSGELRATPQPGRRRGWRSSTDRGGNDVGRRSGEAAGM 92
>10_08_1026 +
22400551-22401161,22401437-22401632,22401837-22401889,
22402369-22402819
Length = 436
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Frame = +1
Query: 148 KPFNLPTRQEAAPP---ATSYGVPDD----SYQAPTNTYGLPQAAPDTEYGVPRDEETTT 306
+PF LP R PP A + GVPD+ S AP D E+G RD+ + +
Sbjct: 31 RPFRLPLRSSRRPPVAAAAASGVPDEWGDRSPSAPEPPSQPDPPIDDDEWG--RDDPSAS 88
Query: 307 ENAENLKV 330
N+ + V
Sbjct: 89 GNSRPVLV 96
>10_05_0071 -
8801918-8802235,8802335-8802488,8802701-8802938,
8803109-8803319,8803391-8803515,8808503-8808622,
8808728-8809586
Length = 674
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 154 FNLPTRQEAAPPATSYGVPDDSYQAPTNTYGLPQAAPD 267
+N R A A+S G P + N YGL Q APD
Sbjct: 178 YNSTLRYAAGVMASSDGFPSTTGYMVHNIYGLVQCAPD 215
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 142 PAKPFNLPTRQEAAPPATSYGVPDDSYQAPTNT-YGLPQAAPDTEYGVPR 288
PA F++PT A PA VP +PT T + L + + PR
Sbjct: 277 PAPTFHVPTPPTPATPAPPADVPPGFTVSPTTTCHSLGYDGASSSFATPR 326
>07_01_0253 +
1888831-1889399,1890121-1890526,1890980-1891195,
1891441-1891548,1892085-1892359,1892462-1892714
Length = 608
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 157 NLPTRQEAAPPATSYGVPDDSYQAPTNTYGLPQAAPDT 270
NLP A PP+TS +++ AP TY P + P +
Sbjct: 51 NLPP--PAPPPSTSLVAAEEASLAPRRTYRFPGSVPSS 86
>06_03_0433 - 20718726-20719895
Length = 389
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 280 VPRDEETTTENAENLKVEGINEKLEEAPKSDAEVVSSQGS 399
V +E+T E+ N+K +G NE EEA K +A V SQ +
Sbjct: 163 VAHGDESTNEDQSNVKSDGSNE--EEAEKKEA--VDSQNA 198
>05_07_0228 -
28526885-28527046,28527151-28527241,28528315-28528455,
28528560-28528625,28529180-28529317,28529759-28529860,
28530156-28530236,28530314-28530383,28530598-28530674,
28531035-28531483
Length = 458
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = +2
Query: 56 ASGRTTGSSDRRWNHKLLLTRPTLLPGSDQRSRSTCPLVKKQLHRPHLTASPTTATKHQP 235
AS +T S+ RR R P S + PL LH P ++ PT A P
Sbjct: 2 ASSNSTSSARRR------AARAPPPPNLGDLSGVSAPLPSNGLHAPSISTHPTNAATPNP 55
Query: 236 TP 241
+P
Sbjct: 56 SP 57
>01_06_0692 +
31276342-31276479,31277161-31277408,31277541-31277722,
31278007-31278143,31278381-31278546,31278615-31278731,
31279038-31279198,31279431-31279634
Length = 450
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 104 LLLTRPTLLPGSDQRSRSTCPLVKKQLHRPHLTASPTTATK 226
LLL R L G Q P++K++ HR + ++ T+ +K
Sbjct: 302 LLLNRNALFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGSK 342
>09_02_0411 + 8721855-8722232
Length = 125
Score = 24.6 bits (51), Expect(2) = 5.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 156 QPAHSSRSSSTGHILRRPRRQ 218
+PA SSR S+ H+ RPR++
Sbjct: 57 RPAASSRISARRHLAARPRKK 77
Score = 21.8 bits (44), Expect(2) = 5.4
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 306 RKRGKPQS*GYKRKTRGGSEK*RRSGE 386
RK+G+ + G +R++ GG + R + E
Sbjct: 75 RKKGEREKGGRRRESTGGGGRRREAEE 101
>09_06_0147 +
21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +1
Query: 160 LPTRQEAAP-PATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVPRDEETTTENAENLKVEG 336
LP+++ + P T+ +P YQ + P VP D + +TE
Sbjct: 634 LPSKKSTSQTPYTAAHIPT-GYQGAQEFIQQGRERPKPRSVVPYDAQGSTEE-------- 684
Query: 337 INEKLEEAPKSDAEVVSSQGSYYIPP 414
EK+ E+P S A+++ S+G PP
Sbjct: 685 --EKMAESPPSKAQILGSRGLDVSPP 708
>03_06_0614 -
35099225-35099461,35099545-35099694,35099919-35100066,
35100152-35100231,35100428-35100594,35100692-35100940,
35101025-35102310,35102423-35102544,35102946-35103272
Length = 921
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 59 SGRTTGSSDRRWNHKLLLTRPTLLPGSDQRSRSTCPLVKKQLHRPHLTA---SPTTATKH 229
SGR++G S R + K L+ R + Q+ S C +Q T SP A +
Sbjct: 387 SGRSSGGSKRSFGAKGLIRRSSSFSSDIQKDVSVCTTTTEQTSSMVSTEAEDSPKNAARD 446
Query: 230 QPTPT 244
TP+
Sbjct: 447 VDTPS 451
>03_02_0341 - 7643426-7643973,7644340-7644505
Length = 237
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +2
Query: 95 NHKLLLTRPTLLPGSDQRSRSTCPLVKKQLHRPHLTASPTTATKHQP---TPTVYHKQLP 265
+H ++L P ++P S P+ + + P +P T H+P T VY P
Sbjct: 164 HHHIVLHPPVIVPPKHDHDHSLPPVHEPPVTVPDHKPAPVTVPDHKPPSTTTPVYAPPKP 223
Query: 266 T 268
T
Sbjct: 224 T 224
>12_01_1022 -
10435409-10435564,10435950-10436219,10436820-10437125,
10437932-10438057,10439825-10439893,10440443-10440487,
10440717-10440776,10441527-10441589,10442186-10442266,
10442494-10442916
Length = 532
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 208 PDDSYQAPTNTYG--LPQAAPDTEYGVPRDEETTTENAENLK 327
PDD QAP YG +P +P+ + + ++ + N EN K
Sbjct: 164 PDDEQQAPKEEYGSYVPDISPEVD-SLGFADKGSASNLENFK 204
>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
Length = 472
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +2
Query: 236 TPTVYHKQLPT-QNMVCLATKKLQPK 310
T ++Y+K L T Q+++ + KKLQPK
Sbjct: 248 TTSMYYKSLSTLQSLLLVCVKKLQPK 273
>09_06_0293 +
22086359-22086496,22086604-22087213,22087407-22087938,
22088617-22089151
Length = 604
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 379 VVSSQGSYYIPPAWISAAAGTVPXGERRQGTWRTPPVFSTRT 504
+ +G + P A G++P GE R +WR +T T
Sbjct: 86 IAGHEGDAFAVPVRRDAVLGSIPGGEARGISWRAVVCTTTTT 127
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 129 CRVQTSEAVQPAHSS 173
CR+QTS+ + PAH+S
Sbjct: 309 CRLQTSQIISPAHAS 323
>07_01_0413 -
3155080-3155274,3155628-3155933,3156062-3156163,
3156262-3156705
Length = 348
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 247 LPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLEEAPKSDAEVVSSQGSYYIP 411
LP AA E+ +E E E E + E+ E+ + +A V++ YY P
Sbjct: 55 LPLAAAGGEFSSEEEEYANEEEEEG--EEYVEEEEEDGEEEEAAAVAAPRGYYPP 107
>03_06_0234 - 32535281-32535919,32536121-32536860,32536911-32536953
Length = 473
Score = 27.1 bits (57), Expect = 9.1
Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +1
Query: 142 PAKPFNLPTRQEAAP-PATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVPRDEETTTENAE 318
PA P E AP P VPD+ AP N PD E P+D +
Sbjct: 176 PAPKDKAPVPDEEAPAPKGRAPVPDEEAPAPNNR----APVPDEEAPNPKDTVLGQDEDA 231
Query: 319 NLKVEGINEKLEEAPKSDA 375
+ + I E +E P A
Sbjct: 232 PVPKDVIPEPVEAVPTPKA 250
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.309 0.128 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,615,258
Number of Sequences: 37544
Number of extensions: 352249
Number of successful extensions: 1081
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -