Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328B12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81058-3|CAB62800.1| 345|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 33 0.16
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 33 0.16
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 32 0.22
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 32 0.22
AF039048-12|AAB94241.2| 296|Caenorhabditis elegans Hypothetical... 31 0.50
Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z73910-5|CAI79219.1| 124|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 29 2.0
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical ... 29 2.0
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 29 2.7
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL021176-2|CAA15974.2| 267|Caenorhabditis elegans Hypothetical ... 29 2.7
Z93383-4|CAB07626.1| 96|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z66562-4|CAA91465.1| 258|Caenorhabditis elegans Hypothetical pr... 28 3.5
U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog (hedg... 28 3.5
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 28 4.7
Z68752-8|CAA92980.2| 171|Caenorhabditis elegans Hypothetical pr... 27 6.2
U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical pr... 27 6.2
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 27 6.2
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 27 6.2
AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical ... 27 6.2
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 6.2
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 27 6.2
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81058-3|CAB62800.1| 345|Caenorhabditis elegans Hypothetical
protein F11E6.3 protein.
Length = 345
Score = 36.3 bits (80), Expect = 0.013
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Frame = +1
Query: 142 PAKPFNLPTRQE-AAPPATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVPRDEETTTENAE 318
PA+ P QE AP A + S + N+YG AAP E P E+ + AE
Sbjct: 50 PAETAPEPVAQEETAPEAPAQDAGYRSKRQAQNSYGDEAAAPAVEESAPAAEQPVEQAAE 109
Query: 319 NLKVEGINEKLEEAPKSDAEVVS---SQGSYYIPPAWISAAAGTVPXGER 459
+ E E EAP DA S +Q SY A A + P E+
Sbjct: 110 PVAQE---EAAPEAPAQDAGYRSKRQAQNSYGDEAAAAPAVEESAPAAEQ 156
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 32.7 bits (71), Expect = 0.16
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +2
Query: 119 PTLLPGSDQRSRSTCPLVKKQLHRPHLT-ASPTTATKHQPTPTVYHKQLPTQNMVCLATK 295
PT + Q +T + K L + T + TT T +PT T T
Sbjct: 133 PTTTTTTTQAPTTTTKKMPKSLKSIYSTIVAKTTTTTEEPTKA----PATTTQATSRVTG 188
Query: 296 KLQPKTRKTSKLRV*TKNSRRLRKVTPKW*VRRALTTSLLP 418
+L K R T K K R +KVTPK+ + ++TT+ +P
Sbjct: 189 RLVGKPRGTFKPHGTRKGWRMWKKVTPKYAGKSSVTTTEVP 229
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 32.7 bits (71), Expect = 0.16
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +2
Query: 119 PTLLPGSDQRSRSTCPLVKKQLHRPHLT-ASPTTATKHQPTPTVYHKQLPTQNMVCLATK 295
PT + Q +T + K L + T + TT T +PT T T
Sbjct: 133 PTTTTTTTQAPTTTTKKMPKSLKSIYSTIVAKTTTTTEEPTKA----PATTTQATSRVTG 188
Query: 296 KLQPKTRKTSKLRV*TKNSRRLRKVTPKW*VRRALTTSLLP 418
+L K R T K K R +KVTPK+ + ++TT+ +P
Sbjct: 189 RLVGKPRGTFKPHGTRKGWRMWKKVTPKYAGKSSVTTTEVP 229
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.16
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +2
Query: 119 PTLLPGSDQRSRSTCPLVKKQLHRPHLT-ASPTTATKHQPTPTVYHKQLPTQNMVCLATK 295
PT + Q +T + K L + T + TT T +PT T T
Sbjct: 133 PTTTTTTTQAPTTTTKKMPKSLKSIYSTIVAKTTTTTEEPTKA----PATTTQATSRVTG 188
Query: 296 KLQPKTRKTSKLRV*TKNSRRLRKVTPKW*VRRALTTSLLP 418
+L K R T K K R +KVTPK+ + ++TT+ +P
Sbjct: 189 RLVGKPRGTFKPHGTRKGWRMWKKVTPKYAGKSSVTTTEVP 229
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 32.7 bits (71), Expect = 0.16
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +2
Query: 119 PTLLPGSDQRSRSTCPLVKKQLHRPHLT-ASPTTATKHQPTPTVYHKQLPTQNMVCLATK 295
PT + Q +T + K L + T + TT T +PT T T
Sbjct: 133 PTTTTTTTQAPTTTTKKMPKSLKSIYSTIVAKTTTTTEEPTKA----PATTTQATSRVTG 188
Query: 296 KLQPKTRKTSKLRV*TKNSRRLRKVTPKW*VRRALTTSLLP 418
+L K R T K K R +KVTPK+ + ++TT+ +P
Sbjct: 189 RLVGKPRGTFKPHGTRKGWRMWKKVTPKYAGKSSVTTTEVP 229
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 184 PPATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVP 285
PP SY P SY P TY P + P + YG P
Sbjct: 86 PPQPSYSPPKSSYGRPEPTYS-PYSRPSSSYGRP 118
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 163 PTRQEAAPPATSYGVPDDS---YQAPTNTYGLP 252
P + +PP +SYG P+ + Y P+++YG P
Sbjct: 86 PPQPSYSPPKSSYGRPEPTYSPYSRPSSSYGRP 118
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +1
Query: 175 EAAPPATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLE 354
E+AP + P +S QAP + A D+ + P+ E+ AE+++ + E +
Sbjct: 613 ESAPASVEEAAPSESTQAPVEEHKDATTAADSSHEEPK-AESDAPAAESVETAPVEEHKD 671
Query: 355 EAPKSDAEVV 384
EA + E V
Sbjct: 672 EASPTALESV 681
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 137 SDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTP 241
S Q + STCP + K+ + HL+ASP T P P
Sbjct: 121 STQSTLSTCPAITKKTTKLHLSASPQTGHAVLPYP 155
>AF039048-12|AAB94241.2| 296|Caenorhabditis elegans Hypothetical
protein F16B4.10 protein.
Length = 296
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -3
Query: 414 RRDVVRALRTHHFGVTFRSLLEFFVYTLNFEVFRVFGCSFFVARHTIFCVG 262
R+++V H V F L +F+Y+ F ++G SFF++ +F +G
Sbjct: 34 RKEIVLFYFRFHIDVLFG--LSYFLYSFFILGFTIYGSSFFISNSDLFWLG 82
>Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical
protein F02D8.2 protein.
Length = 285
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 184 PPATSYGVPDDSYQAPTNTYGL-PQ-AAPDTEYGVPR 288
PPA SY +Y AP+N Y PQ + P Y +P+
Sbjct: 68 PPANSYATAPANYAAPSNAYPFAPQYSIPMNSYAMPK 104
>Z73910-5|CAI79219.1| 124|Caenorhabditis elegans Hypothetical
protein M117.6 protein.
Length = 124
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Frame = -3
Query: 357 LLEFFVYTLNFEVFRVFGCSFFVARHTIFCVGSCLW*T-----VGVGWCLVAVVGDAVRC 193
LL FF + F VF + +F + + + +C + C + C
Sbjct: 26 LLFFFPNLMEFSVFFLAKSTFILIFNVFMKLNNCFQVFRYQRFLQYSTCCSRIRRTVPEC 85
Query: 192 GRWSCFLTSG---QVERLRWSEPGR 127
G W CFL +G +ER EPG+
Sbjct: 86 GFWRCFLPTGGSKMLERTEKDEPGK 110
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 133 GFRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPTNTYGLPQAA 261
GF P+ N+P R APP T+ ++ + T+ LP +A
Sbjct: 183 GFSPSSHHNIPIRHSPAPPFTTSNSSYNNIKKSTDNTILPGSA 225
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 133 GFRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPTNTYGLPQAA 261
GF P+ N+P R APP T+ ++ + T+ LP +A
Sbjct: 183 GFSPSSHHNIPIRHSPAPPFTTSNSSYNNIKKSTDNTILPGSA 225
>AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical
protein Y62H9A.4 protein.
Length = 212
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 184 PPATSYGVPDDSYQAPTNTY 243
PPAT+YG + Y+ P N Y
Sbjct: 72 PPATNYGTNGNEYRPPNNVY 91
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 28.7 bits (61), Expect = 2.7
Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 7/145 (4%)
Frame = +1
Query: 61 RQNYRFQRQEVEXXXXXXXXXXXXGFRPAKPFNL-PTRQEAAPPATSYG------VPDDS 219
+QNY Q Q+ F N+ R A P YG V
Sbjct: 81 QQNYMMQHQQQHQQQHHYHQQQQQQFMFNANANVFVPRGHAQQPPAEYGFYNGPPVHQQH 140
Query: 220 YQAPTNTYGLPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLEEAPKSDAEVVSSQGS 399
YQ YG +AP + Y V ++ T + +++ +P+ ++ +S+ S
Sbjct: 141 YQQQQQHYGAATSAPSSSYNVMYQQQEDTGIDAFAQFGQQSQQYHPSPELSEQINASKCS 200
Query: 400 YYIPPAWISAAAGTVPXGERRQGTW 474
Y+ + + GE TW
Sbjct: 201 PYLTEILVGCEQ-LIAEGEEDSPTW 224
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 152 RSTCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNMVCLATKKLQPKTRKTSK 328
RS+ P+V + RP + S H P P+VY + T ++ A T K SK
Sbjct: 167 RSSLPIVSPDVRRPPPSLSIPLPPMHIPPPSVYF--ISTPSIYSTAKSSTSTVTSKLSK 223
>AL021176-2|CAA15974.2| 267|Caenorhabditis elegans Hypothetical
protein Y43E12A.2 protein.
Length = 267
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 158 TCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNMVCLATKKLQPKTR 316
TC L K++ + + A+ + P HKQLP + V L K Q T+
Sbjct: 194 TCQLCKRKWNSQNSVANEPQSCIKCHVPVFPHKQLPVEKAVTLGLIKAQNVTK 246
>Z93383-4|CAB07626.1| 96|Caenorhabditis elegans Hypothetical
protein F54B8.4 protein.
Length = 96
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 117 ALRSCRVQTSEAVQPAHSSRSSSTGHILRRPRRQ 218
A++ + + A+QPAH +R++ G + P++Q
Sbjct: 61 AVKQVHEKPTPAIQPAHYNRATGNGQVRNIPQKQ 94
>Z66562-4|CAA91465.1| 258|Caenorhabditis elegans Hypothetical
protein F42E11.3 protein.
Length = 258
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -3
Query: 402 VRALRTHHFGVTFRSLLEFFVYTLNFEVFRVFGCSFFVARHT 277
+ R H+ + F YT +F V G +FF++ HT
Sbjct: 17 LNVFRKIHYLELLSQMFGFLFYTFYLIIFLVHGKTFFISEHT 58
>U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 9 protein.
Length = 588
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 184 PPATSYGVPDDSYQAPTNTY--GLPQ--AAPDTEYGVPRDEETTTEN 312
PPA +G SYQ PT +Y G PQ AP + +TT N
Sbjct: 173 PPAAKWGNNRPSYQNPTPSYQQGYPQQFPAPQRQQQYQPQPQTTNYN 219
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 247 LPQAAPDTEYGVPR-DEETTTENAENLKVEGINEKL 351
L AAP T G + DEET AEN ++ NE+L
Sbjct: 500 LAAAAPSTSSGASKEDEETEKLKAENAQLHEKNEEL 535
>Z68752-8|CAA92980.2| 171|Caenorhabditis elegans Hypothetical
protein T12G3.6 protein.
Length = 171
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -2
Query: 268 CRELLVVDRRCWLVLGSCRRGRRKMWPVELLLDEW 164
C E + + + +L+L C++ +K P E +D+W
Sbjct: 22 CHEKPLTEDQLFLLLSKCQQHTKKCMPSEEEIDQW 56
>U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical
protein F59A3.2b protein.
Length = 687
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 136 FRPAKPF-NLPTR-QEAAPPATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVPRDE 294
F P P NLP+ PP Y P + PTN Y P ++ Y VP E
Sbjct: 537 FVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNTY-VPNQE 590
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 136 FRPAKPF-NLPTR-QEAAPPATSYGVPDDSYQAPTNTYGLPQAAPDTEYGVPRDE 294
F P P NLP+ PP Y P + PTN Y P ++ Y VP E
Sbjct: 537 FVPISPVKNLPSDFNPRIPPPQIYSSPGQALFNPTNLYPTPPSSLPNTY-VPNQE 590
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.5 bits (58), Expect = 6.2
Identities = 28/127 (22%), Positives = 40/127 (31%), Gaps = 5/127 (3%)
Frame = +1
Query: 151 PFNLPTRQEAAPPAT----SYGVPDDSYQAPTNTYG-LPQAAPDTEYGVPRDEETTTENA 315
P P +E PAT + G P+ N + + A +T P EET
Sbjct: 220 PAPTPAAEETPAPATEASNAVGTPEGYVDGTANAASAVAEPAVETPAPAPAAEETPAPAT 279
Query: 316 ENLKVEGINEKLEEAPKSDAEVVSSQGSYYIPPAWISAAAGTVPXGERRQGTWRTPPVFS 495
+ + EE P + + + + A AA P E T S
Sbjct: 280 SSEEAPAPAPTAEETPAPETVSAAPEAANSYDSAGGDAATAPAPSSEAADAAAPTDSAAS 339
Query: 496 TRTKTAL 516
T AL
Sbjct: 340 ADTTAAL 346
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 184 PPATSYGVPDDSYQAPTNTYGLPQAAPDTEY 276
PPA + +P D+YQ T Y P TEY
Sbjct: 294 PPAPT--MPPDAYQPTTEAYYYPPTETSTEY 322
>AF101315-1|AAC69225.2| 369|Caenorhabditis elegans Hypothetical
protein T22H9.4 protein.
Length = 369
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 337 INEKLEEAPKSDAEVVSSQGSYYIPPAWISAAAGTVPXGERRQGTWRTP 483
++EKL AP+ + S G + IP A SA A T P G + T P
Sbjct: 235 LSEKLNMAPQVQMKFDFSAGGFMIPAA-TSANASTSPAGSPFETTSPMP 282
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 193 TSYGVPDDSYQAPTNTYGLPQAAPDTEYGVPRDE 294
+ YG PDD Y P YG + D +YG P+++
Sbjct: 440 SEYGRPDDRYSKP-EPYGYSR---DRDYGAPQNQ 469
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 504 RSCTEDGRCTPCSLTSFSXWNCT 436
R C +GRCT CS S NC+
Sbjct: 946 RFCINNGRCTICSSPSHITGNCS 968
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 135 VQTSEAVQPAHSSRSSSTGHILRRPRRQLPSTNQ 236
+ T +A QP ++ S+STG I P P+T +
Sbjct: 1523 IVTPQAPQPTAAATSASTGPIAPEPTTAAPTTTE 1556
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.309 0.128 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,087,602
Number of Sequences: 27780
Number of extensions: 263625
Number of successful extensions: 926
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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