Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328B09f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035014-1|AAH35014.1| 361|Homo sapiens NudC domain containing ... 52 9e-07
AB028991-1|BAA83020.1| 354|Homo sapiens KIAA1068 protein protein. 51 2e-06
BC011673-1|AAH11673.1| 220|Homo sapiens NUDCD3 protein protein. 45 1e-04
BC003691-1|AAH03691.1| 220|Homo sapiens NudC domain containing ... 45 1e-04
AK024226-1|BAB14855.1| 256|Homo sapiens protein ( Homo sapiens ... 45 1e-04
AC004453-1|AAQ96892.1| 220|Homo sapiens unknown protein. 45 1e-04
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 36 0.086
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 36 0.086
BC021139-1|AAH21139.1| 331|Homo sapiens nuclear distribution ge... 33 0.61
BC015153-1|AAH15153.1| 331|Homo sapiens nuclear distribution ge... 33 0.61
BC007280-1|AAH07280.1| 331|Homo sapiens nuclear distribution ge... 33 0.61
BC006147-1|AAH06147.1| 331|Homo sapiens nuclear distribution ge... 33 0.61
BC003132-1|AAH03132.1| 331|Homo sapiens nuclear distribution ge... 33 0.61
BC002399-1|AAH02399.1| 331|Homo sapiens nuclear distribution ge... 33 0.61
AL356390-9|CAI13563.1| 209|Homo sapiens nuclear distribution ge... 33 0.61
AL356390-7|CAI13561.1| 331|Homo sapiens nuclear distribution ge... 33 0.61
AF241788-1|AAG44476.1| 211|Homo sapiens NPD011 protein. 33 0.61
AF130736-1|AAD30517.1| 331|Homo sapiens nuclear distribution pr... 33 0.61
AF125465-1|AAD39921.1| 331|Homo sapiens nuclear distribution pr... 33 0.61
AF100760-1|AAD43024.1| 331|Homo sapiens MNUDC protein protein. 33 0.61
AF086922-1|AAP97152.1| 331|Homo sapiens SIG-92 protein. 33 0.61
AF390562-1|AAN40840.1| 1826|Homo sapiens TBP-associated factor R... 32 1.4
X07024-1|CAA30073.1| 1554|Homo sapiens CCG1 protein protein. 31 1.9
D90359-1|BAA14374.1| 1872|Homo sapiens CCG1 protein protein. 31 1.9
AY623109-1|AAT38105.1| 1893|Homo sapiens TAF1 RNA polymerase II,... 31 1.9
AM711895-1|CAM98558.1| 194|Homo sapiens dystonia 3 (with Parkin... 31 1.9
AM711894-1|CAM98557.1| 182|Homo sapiens dystonia 3 (with Parkin... 31 1.9
AM711893-1|CAM98556.1| 491|Homo sapiens dystonia 3 (with Parkin... 31 1.9
AM711892-1|CAM98555.1| 246|Homo sapiens dystonia 3 (with Parkin... 31 1.9
AJ555149-1|CAD87528.2| 246|Homo sapiens putative DYT3 protein p... 31 1.9
AJ555148-1|CAD87527.2| 457|Homo sapiens putative DYT3 protein p... 31 1.9
AJ549250-1|CAD70493.3| 455|Homo sapiens putative DYT3 protein p... 31 1.9
AJ549248-1|CAD70491.3| 489|Homo sapiens putative DYT3 protein p... 31 1.9
AB209316-1|BAD92553.1| 1070|Homo sapiens TBP-associated factor 1... 31 1.9
AL356390-6|CAI13560.1| 133|Homo sapiens nuclear distribution ge... 31 2.4
D86322-1|BAA22590.1| 610|Homo sapiens calmegin protein. 30 5.7
BC028357-1|AAH28357.1| 610|Homo sapiens calmegin protein. 30 5.7
>BC035014-1|AAH35014.1| 361|Homo sapiens NudC domain containing 3
protein.
Length = 361
Score = 52.4 bits (120), Expect = 9e-07
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 34/158 (21%)
Frame = +3
Query: 3 ENIGFPPGVAEELVIKVLRTCDPKNVKEPHKHT-DLNNEIMCSTV--AQEVEVIASE--- 164
+ +GFPPG A+ LV++V +T D ++ K +L +I A+ V A+E
Sbjct: 49 DRMGFPPGAAQALVLQVFKTFDHMARQDDEKRRQELEEKIRRKEEEEAKTVSAAAAEKEP 108
Query: 165 ----------DTSADLEASGEQDVLTSEHQVRE-AVSSQPEEY------------KPPVI 275
D++ +L+ E + + V+E A SQ E +PP++
Sbjct: 109 VPVPVQEIEIDSTTELDGHQEVEKVQPPGPVKEMAHGSQEAEAPGAVAGAAEVPREPPIL 168
Query: 276 P-----IQKRSECYNGADRENYSWAQTLMDLDVTVKLP 374
P QK + YNGA RENY+W+Q DL+V V LP
Sbjct: 169 PRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPLP 206
>AB028991-1|BAA83020.1| 354|Homo sapiens KIAA1068 protein protein.
Length = 354
Score = 51.2 bits (117), Expect = 2e-06
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 34/158 (21%)
Frame = +3
Query: 3 ENIGFPPGVAEELVIKVLRTCDPKNVKEPHKHT-DLNNEIMCSTV--AQEVEVIASE--- 164
+ +GFPPG A+ LV++V +T D ++ K +L +I A+ V A+E
Sbjct: 42 DRMGFPPGAAQALVLQVFKTFDHMARQDDEKRRQELEEKIRRKEEEEAKTVSAAAAEKEP 101
Query: 165 ----------DTSADLEASGEQDVLTSEHQVRE-AVSSQPEEY------------KPPVI 275
D++ +L+ E + + V+E A SQ E +PP++
Sbjct: 102 VPVPVQEIEIDSTTELDGHQEVEKVQPPGPVKEMAHGSQEAEAPGAVAGAAEVPREPPIL 161
Query: 276 P-----IQKRSECYNGADRENYSWAQTLMDLDVTVKLP 374
P QK + YNGA RENY+W+Q DL+V V +P
Sbjct: 162 PRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVP 199
>BC011673-1|AAH11673.1| 220|Homo sapiens NUDCD3 protein protein.
Length = 220
Score = 45.2 bits (102), Expect = 1e-04
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Frame = +3
Query: 261 KPPVIP-----IQKRSECYNGADRENYSWAQTLMDLDVTVKLP 374
+PP++P QK + YNGA RENY+W+Q DL+V V +P
Sbjct: 23 EPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVP 65
>BC003691-1|AAH03691.1| 220|Homo sapiens NudC domain containing 3
protein.
Length = 220
Score = 45.2 bits (102), Expect = 1e-04
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Frame = +3
Query: 261 KPPVIP-----IQKRSECYNGADRENYSWAQTLMDLDVTVKLP 374
+PP++P QK + YNGA RENY+W+Q DL+V V +P
Sbjct: 23 EPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVP 65
>AK024226-1|BAB14855.1| 256|Homo sapiens protein ( Homo sapiens
cDNA FLJ14164 fis, clone NT2RP1000460, weakly similar to
NUCLEAR MOVEMENT PROTEIN NUDC. ).
Length = 256
Score = 45.2 bits (102), Expect = 1e-04
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Frame = +3
Query: 261 KPPVIP-----IQKRSECYNGADRENYSWAQTLMDLDVTVKLP 374
+PP++P QK + YNGA RENY+W+Q DL+V V +P
Sbjct: 23 EPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVP 65
>AC004453-1|AAQ96892.1| 220|Homo sapiens unknown protein.
Length = 220
Score = 45.2 bits (102), Expect = 1e-04
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Frame = +3
Query: 261 KPPVIP-----IQKRSECYNGADRENYSWAQTLMDLDVTVKLP 374
+PP++P QK + YNGA RENY+W+Q DL+V V +P
Sbjct: 23 EPPILPRIQEQFQKNPDSYNGAVRENYTWSQDYTDLEVRVPVP 65
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 35.9 bits (79), Expect = 0.086
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +3
Query: 6 NIGFPPGVAEELVIKVLRTCDPKNVKEPHKHTDLNNEIMCSTVAQEVEVIASEDTSADLE 185
NI PG +E V R DP+ ++EP + + +C+T + E+ + D
Sbjct: 3106 NIDVAPGAPQEKN-GVHRKSDPEELREPQQSFSEAQQQLCNTRQEVNELRKLLEEERDQR 3164
Query: 186 ASGEQDVLTSEHQVREAVSSQPEEYKPPVI 275
+ E + +E Q+R S+ + + P+I
Sbjct: 3165 VAAENALSVAEEQIRRLEHSEWDSSRTPII 3194
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 35.9 bits (79), Expect = 0.086
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +3
Query: 6 NIGFPPGVAEELVIKVLRTCDPKNVKEPHKHTDLNNEIMCSTVAQEVEVIASEDTSADLE 185
NI PG +E V R DP+ ++EP + + +C+T + E+ + D
Sbjct: 3072 NIDVAPGAPQEKN-GVHRKSDPEELREPQQSFSEAQQQLCNTRQEVNELRKLLEEERDQR 3130
Query: 186 ASGEQDVLTSEHQVREAVSSQPEEYKPPVI 275
+ E + +E Q+R S+ + + P+I
Sbjct: 3131 VAAENALSVAEEQIRRLEHSEWDSSRTPII 3160
>BC021139-1|AAH21139.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>BC015153-1|AAH15153.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>BC007280-1|AAH07280.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>BC006147-1|AAH06147.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>BC003132-1|AAH03132.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>BC002399-1|AAH02399.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>AL356390-9|CAI13563.1| 209|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 209
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 169 NGADLPNYRWTQTLSELDLAV 189
>AL356390-7|CAI13561.1| 331|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>AF241788-1|AAG44476.1| 211|Homo sapiens NPD011 protein.
Length = 211
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 116 NGADLPNYRWTQTLSELDLAV 136
>AF130736-1|AAD30517.1| 331|Homo sapiens nuclear distribution
protein C homolog protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>AF125465-1|AAD39921.1| 331|Homo sapiens nuclear distribution
protein protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>AF100760-1|AAD43024.1| 331|Homo sapiens MNUDC protein protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>AF086922-1|AAP97152.1| 331|Homo sapiens SIG-92 protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLDVTV 365
NGAD NY W QTL +LD+ V
Sbjct: 165 NGADLPNYRWTQTLSELDLAV 185
>AF390562-1|AAN40840.1| 1826|Homo sapiens TBP-associated factor RNA
polymerase 1-like protein.
Length = 1826
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 1445 DLQTLRENVRKCLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1504
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 1505 DKLARLEKA 1513
>X07024-1|CAA30073.1| 1554|Homo sapiens CCG1 protein protein.
Length = 1554
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 1370 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1429
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 1430 DKLARLEKA 1438
>D90359-1|BAA14374.1| 1872|Homo sapiens CCG1 protein protein.
Length = 1872
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 1426 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1485
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 1486 DKLARLEKA 1494
>AY623109-1|AAT38105.1| 1893|Homo sapiens TAF1 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 250kD
protein.
Length = 1893
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 1447 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1506
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 1507 DKLARLEKA 1515
>AM711895-1|CAM98558.1| 194|Homo sapiens dystonia 3 (with
Parkinsonism) protein.
Length = 194
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 140 DKLARLEKA 148
>AM711894-1|CAM98557.1| 182|Homo sapiens dystonia 3 (with
Parkinsonism) protein.
Length = 182
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 140 DKLARLEKA 148
>AM711893-1|CAM98556.1| 491|Homo sapiens dystonia 3 (with
Parkinsonism) protein.
Length = 491
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 140 DKLARLEKA 148
>AM711892-1|CAM98555.1| 246|Homo sapiens dystonia 3 (with
Parkinsonism) protein.
Length = 246
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 140 DKLARLEKA 148
>AJ555149-1|CAD87528.2| 246|Homo sapiens putative DYT3 protein
protein.
Length = 246
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 140 DKLARLEKA 148
>AJ555148-1|CAD87527.2| 457|Homo sapiens putative DYT3 protein
protein.
Length = 457
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 140 DKLARLEKA 148
>AJ549250-1|CAD70493.3| 455|Homo sapiens putative DYT3 protein
protein.
Length = 455
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 140 DKLARLEKA 148
>AJ549248-1|CAD70491.3| 489|Homo sapiens putative DYT3 protein
protein.
Length = 489
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 80 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 139
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 140 DKLARLEKA 148
>AB209316-1|BAD92553.1| 1070|Homo sapiens TBP-associated factor 1
isoform 2 variant protein.
Length = 1070
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 201 DVLTSEHQVREAVSSQPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDL-DVTVKLPP 377
D+ T VR+ + EE++ + I K S YNG +Q+++DL D +K
Sbjct: 590 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 649
Query: 378 DKIFKRPKS 404
DK+ + K+
Sbjct: 650 DKLARLEKA 658
>AL356390-6|CAI13560.1| 133|Homo sapiens nuclear distribution gene
C homolog (A. nidulans) protein.
Length = 133
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 303 NGADRENYSWAQTLMDLD 356
NGAD NY W QTL +LD
Sbjct: 116 NGADLPNYRWTQTLSELD 133
>D86322-1|BAA22590.1| 610|Homo sapiens calmegin protein.
Length = 610
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/89 (23%), Positives = 34/89 (38%)
Frame = +3
Query: 63 CDPKNVKEPHKHTDLNNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVREAVS 242
C P+ VK+ HK T+ +C + Q V+ E+ D L E + +
Sbjct: 491 CWPRKVKKKHKDTEYKKTDIC--IPQTKGVLEQEEKEEKAALEKPMD-LEEEKKQNDGEM 547
Query: 243 SQPEEYKPPVIPIQKRSECYNGADRENYS 329
+ EE P ++ E G + N S
Sbjct: 548 LEKEEESEPEEKSEEEIEIIEGQEESNQS 576
>BC028357-1|AAH28357.1| 610|Homo sapiens calmegin protein.
Length = 610
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/89 (23%), Positives = 34/89 (38%)
Frame = +3
Query: 63 CDPKNVKEPHKHTDLNNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVREAVS 242
C P+ VK+ HK T+ +C + Q V+ E+ D L E + +
Sbjct: 491 CWPRKVKKKHKDTEYKKTDIC--IPQTKGVLEQEEKEEKAALEKPMD-LEEEKKQNDGEM 547
Query: 243 SQPEEYKPPVIPIQKRSECYNGADRENYS 329
+ EE P ++ E G + N S
Sbjct: 548 LEKEEESEPEEKSEEEIEIIEGQEESNQS 576
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,425,141
Number of Sequences: 237096
Number of extensions: 1399414
Number of successful extensions: 4536
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 4428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4536
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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