Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328B04f
         (482 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007049-1|AAP35698.1|  286|Homo sapiens ceroid-lipofuscinosis, ...    29   6.5  
BC007725-1|AAH07725.1|  286|Homo sapiens ceroid-lipofuscinosis, ...    29   6.5  
AF123761-1|AAF13119.1|  286|Homo sapiens putative transmembrane ...    29   6.5  
AF123760-1|AAF13118.1|  286|Homo sapiens putative transmembrane ...    29   6.5  
AF123759-1|AAF13117.1|  286|Homo sapiens putative transmembrane ...    29   6.5  
AF123758-1|AAF13116.1|  286|Homo sapiens putative transmembrane ...    29   6.5  
AF123757-1|AAF13115.1|  286|Homo sapiens putative transmembrane ...    29   6.5  

>BT007049-1|AAP35698.1|  286|Homo sapiens ceroid-lipofuscinosis,
           neuronal 8 (epilepsy, progressive with mental retardatio
           protein.
          Length = 286

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 37  AGLWKTMGHPIVNMDKSTA--SWCKKGMVLTRGRIC 138
           AGLW  +G P+++ DK+    +WC   +    G  C
Sbjct: 80  AGLWALLGDPVLHADKARGQQNWCWFHITTATGFFC 115


>BC007725-1|AAH07725.1|  286|Homo sapiens ceroid-lipofuscinosis,
           neuronal 8 (epilepsy, progressive with mental retardatio
           protein.
          Length = 286

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 37  AGLWKTMGHPIVNMDKSTA--SWCKKGMVLTRGRIC 138
           AGLW  +G P+++ DK+    +WC   +    G  C
Sbjct: 80  AGLWALLGDPVLHADKARGQQNWCWFHITTATGFFC 115


>AF123761-1|AAF13119.1|  286|Homo sapiens putative transmembrane
           protein protein.
          Length = 286

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 37  AGLWKTMGHPIVNMDKSTA--SWCKKGMVLTRGRIC 138
           AGLW  +G P+++ DK+    +WC   +    G  C
Sbjct: 80  AGLWALLGDPVLHADKARGQQNWCWFHITTATGFFC 115


>AF123760-1|AAF13118.1|  286|Homo sapiens putative transmembrane
           protein protein.
          Length = 286

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 37  AGLWKTMGHPIVNMDKSTA--SWCKKGMVLTRGRIC 138
           AGLW  +G P+++ DK+    +WC   +    G  C
Sbjct: 80  AGLWALLGDPVLHADKARGQQNWCWFHITTATGFFC 115


>AF123759-1|AAF13117.1|  286|Homo sapiens putative transmembrane
           protein protein.
          Length = 286

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 37  AGLWKTMGHPIVNMDKSTA--SWCKKGMVLTRGRIC 138
           AGLW  +G P+++ DK+    +WC   +    G  C
Sbjct: 80  AGLWALLGDPVLHADKARGQQNWCWFHITTATGFFC 115


>AF123758-1|AAF13116.1|  286|Homo sapiens putative transmembrane
           protein protein.
          Length = 286

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 37  AGLWKTMGHPIVNMDKSTA--SWCKKGMVLTRGRIC 138
           AGLW  +G P+++ DK+    +WC   +    G  C
Sbjct: 80  AGLWALLGDPVLHADKARGQQNWCWFHITTATGFFC 115


>AF123757-1|AAF13115.1|  286|Homo sapiens putative transmembrane
           protein protein.
          Length = 286

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 37  AGLWKTMGHPIVNMDKSTA--SWCKKGMVLTRGRIC 138
           AGLW  +G P+++ DK+    +WC   +    G  C
Sbjct: 80  AGLWALLGDPVLHADKARGQQNWCWFHITTATGFFC 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,890,422
Number of Sequences: 237096
Number of extensions: 1778764
Number of successful extensions: 3757
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3757
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)