Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328A11f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   3.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   4.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   4.4  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   5.8  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   7.7  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   7.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.7  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 384 ARILSTEKNVGHRRERSAATASALRD 461
           ARIL+  +   H R +  A A+ L D
Sbjct: 149 ARILAAMQQSSHSRSQEKAVAAELED 174


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 137 LVLVMSCGTWSLEKSSYR 84
           L+L   CG WS +KS  R
Sbjct: 361 LMLPNCCGKWSSQKSEPR 378


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 151 FQALHYLQNVCNHPKLVLTPD 213
           FQ L  L N C HP +++  D
Sbjct: 61  FQKL-LLSNPCKHPTIIMPQD 80


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 150 ISGSTLPPKRLQPPEAGVDSGP 215
           +  S  PPK   PP     SGP
Sbjct: 332 LGDSDTPPKPAPPPPPPSSSGP 353


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
          protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +1

Query: 34 PKITQDYYCELSPL 75
          P +   ++C++SPL
Sbjct: 50 PNVINPFFCDMSPL 63


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -1

Query: 248 LNCLAMVCASGWSG-VNTSFGW 186
           + CL +VC + WS  V+T   W
Sbjct: 385 IQCLTVVCLAFWSFIVSTILLW 406


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 518 RVTMACLCWGGTEPSSRRYVTEGRCCSSR 432
           R++  C+       S  R +  G+C SSR
Sbjct: 27  RISAGCVSRISNRISRNRVLLRGQCISSR 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,869
Number of Sequences: 438
Number of extensions: 2761
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)