Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328A09f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058457-1|AAL13686.1| 637|Drosophila melanogaster GH25737p pro... 41 9e-04
AE014298-533|AAF45876.2| 637|Drosophila melanogaster CG10803-PA... 41 9e-04
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 30 2.2
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 30 2.2
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 30 2.2
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 30 2.2
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 30 2.2
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 30 2.2
AY119623-1|AAM50277.1| 364|Drosophila melanogaster LD46912p pro... 29 3.8
AE014134-1457|AAF52638.1| 364|Drosophila melanogaster CG7810-PA... 29 3.8
>AY058457-1|AAL13686.1| 637|Drosophila melanogaster GH25737p
protein.
Length = 637
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 153 CPVRALQRYRKTSGVKDAKLIVMNLASHRVST--TDGSHEGVLDVVGVDKHVPQLIDAFA 326
C + +YR+ +AK I+++L + S + G +E +L++ +DKH P+LI+AF
Sbjct: 574 CLAALMDKYREKRN-SNAKFIMVSLRQRQRSMIYSSGRNENLLELCSLDKHTPRLINAFV 632
Query: 327 LGHFY 341
FY
Sbjct: 633 RNKFY 637
>AE014298-533|AAF45876.2| 637|Drosophila melanogaster CG10803-PA
protein.
Length = 637
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 153 CPVRALQRYRKTSGVKDAKLIVMNLASHRVST--TDGSHEGVLDVVGVDKHVPQLIDAFA 326
C + +YR+ +AK I+++L + S + G +E +L++ +DKH P+LI+AF
Sbjct: 574 CLAALMDKYREKRN-SNAKFIMVSLRQRQRSMIYSSGRNENLLELCSLDKHTPRLINAFV 632
Query: 327 LGHFY 341
FY
Sbjct: 633 RNKFY 637
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 180 RKTSGVKDAKLIVMNLASHRVSTTDGSHEGVLDVVGVDKHVPQL 311
RKT G + A LI AS+ +T SH + GV+ HVPQL
Sbjct: 4570 RKTIGEQTANLIEEVTASN--ATVAASHLAPPEGAGVESHVPQL 4611
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 180 RKTSGVKDAKLIVMNLASHRVSTTDGSHEGVLDVVGVDKHVPQL 311
RKT G + A LI AS+ +T SH + GV+ HVPQL
Sbjct: 4576 RKTIGEQTANLIEEVTASN--ATVAASHLAPPEGAGVESHVPQL 4617
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 180 RKTSGVKDAKLIVMNLASHRVSTTDGSHEGVLDVVGVDKHVPQL 311
RKT G + A LI AS+ +T SH + GV+ HVPQL
Sbjct: 4519 RKTIGEQTANLIEEVTASN--ATVAASHLAPPEGAGVESHVPQL 4560
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 180 RKTSGVKDAKLIVMNLASHRVSTTDGSHEGVLDVVGVDKHVPQL 311
RKT G + A LI AS+ +T SH + GV+ HVPQL
Sbjct: 4519 RKTIGEQTANLIEEVTASN--ATVAASHLAPPEGAGVESHVPQL 4560
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 180 RKTSGVKDAKLIVMNLASHRVSTTDGSHEGVLDVVGVDKHVPQL 311
RKT G + A LI AS+ +T SH + GV+ HVPQL
Sbjct: 4576 RKTIGEQTANLIEEVTASN--ATVAASHLAPPEGAGVESHVPQL 4617
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 180 RKTSGVKDAKLIVMNLASHRVSTTDGSHEGVLDVVGVDKHVPQL 311
RKT G + A LI AS+ +T SH + GV+ HVPQL
Sbjct: 4576 RKTIGEQTANLIEEVTASN--ATVAASHLAPPEGAGVESHVPQL 4617
>AY119623-1|AAM50277.1| 364|Drosophila melanogaster LD46912p
protein.
Length = 364
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 252 DGSHEGVLDVVGVDKHVPQLIDAF 323
DG H+G D+V +H P++ID F
Sbjct: 10 DGDHQGNNDIVPNPEHPPEIIDIF 33
>AE014134-1457|AAF52638.1| 364|Drosophila melanogaster CG7810-PA
protein.
Length = 364
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 252 DGSHEGVLDVVGVDKHVPQLIDAF 323
DG H+G D+V +H P++ID F
Sbjct: 10 DGDHQGNNDIVPNPEHPPEIIDIF 33
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,255,155
Number of Sequences: 53049
Number of extensions: 350777
Number of successful extensions: 1015
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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