Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328A08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 97 9e-21
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 33 0.094
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 33 0.094
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 33 0.094
AF067936-7|AAC19215.1| 316|Caenorhabditis elegans Hypothetical ... 33 0.16
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 32 0.22
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 32 0.22
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 32 0.22
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 32 0.29
U00065-3|AAK68286.3| 981|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z83220-1|CAB05700.2| 440|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 29 1.5
Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL110487-6|CAB54433.2| 472|Caenorhabditis elegans Hypothetical ... 29 1.5
Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical p... 28 3.5
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 28 3.5
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 28 3.5
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 28 3.5
Z49969-5|CAA90269.1| 224|Caenorhabditis elegans Hypothetical pr... 28 3.5
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 28 3.5
AF025465-13|AAB71022.2| 142|Caenorhabditis elegans Hypothetical... 28 3.5
Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical pr... 28 4.7
U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF106583-7|AAD03130.1| 299|Caenorhabditis elegans Hypothetical ... 27 6.2
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical pr... 27 8.1
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 27 8.1
AF016445-1|AAC69057.2| 367|Caenorhabditis elegans Serpentine re... 27 8.1
AC024832-7|AAL27257.1| 389|Caenorhabditis elegans Hypothetical ... 27 8.1
AC024832-6|AAL27256.1| 459|Caenorhabditis elegans Hypothetical ... 27 8.1
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 96.7 bits (230), Expect = 9e-21
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Frame = +3
Query: 72 RPHIPFKACLESFMREETIEQFFSSALNKKVTAHKITRLATFPDYLLIQLKKFTIKEDWT 251
R + KA + ++ + I+ + S + A + TFPDYL Q+ KF D T
Sbjct: 488 RYSVDMKAAIHAYFDVQKIDDYISPITGEPKGATNTISMKTFPDYLFFQVSKFAYNVDGT 547
Query: 252 PAKLDVAVDMPWEVDLSSLRGRGLQPDEKQLPEASADTPAPTYD-----EVLLSQLLDMG 416
KLD+ +++ E+DLS RG G E LP+ P T D + +L+ MG
Sbjct: 548 QKKLDMELEIEEELDLSGYRGHGKLEHEIALPDEEPTAPRTTPDIPASVRFVAGELMLMG 607
Query: 417 FPVEACKKSLYYTNNSGIEAASNWLMEHMTD 509
F AC ++ YY+N + +E ASNWLMEHM D
Sbjct: 608 FCENACYRAAYYSNGN-VEIASNWLMEHMDD 637
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 141 SSALNKKVTAHKITRLATFPDYLLIQLKKFTIKEDW-TPAKLDVAVDMPWEVDLSSLRGR 317
S LN+ K T+++ P YL + + +F KE T AK+ +V P ++D L +
Sbjct: 272 SEELNRDAKWQKNTQISRLPKYLTVNINRFFYKESTKTNAKILKSVQFPMQLDTYDLCSQ 331
Query: 318 GLQ 326
L+
Sbjct: 332 ELK 334
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 141 SSALNKKVTAHKITRLATFPDYLLIQLKKFTIKEDW-TPAKLDVAVDMPWEVDLSSLRGR 317
S LN+ K T+++ P YL + + +F KE T AK+ +V P ++D L +
Sbjct: 272 SEELNRDAKWQKNTQISRLPKYLTVNINRFFYKESTKTNAKILKSVQFPMQLDTYDLCSQ 331
Query: 318 GLQ 326
L+
Sbjct: 332 ELK 334
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 141 SSALNKKVTAHKITRLATFPDYLLIQLKKFTIKEDW-TPAKLDVAVDMPWEVDLSSLRGR 317
S LN+ K T+++ P YL + + +F KE T AK+ +V P ++D L +
Sbjct: 272 SEELNRDAKWQKNTQISRLPKYLTVNINRFFYKESTKTNAKILKSVQFPMQLDTYDLCSQ 331
Query: 318 GLQ 326
L+
Sbjct: 332 ELK 334
>AF067936-7|AAC19215.1| 316|Caenorhabditis elegans Hypothetical
protein C24G6.8 protein.
Length = 316
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 393 LSQLLDMGFPVEACKKSLYYTNNSGIEAASNWLMEHMTD 509
L+ LLD+GF +L TN++G+E A W++E +
Sbjct: 134 LAHLLDLGFDEYTAVLALKRTNSAGVEQAVAWIVERSNE 172
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 96 CLESFMREETIEQFFS-SALNKKVTAHKITRLATFPDYLLIQLKKFT-IKEDWTPAKLDV 269
C+E F ET++ KK K+ + P YL+I LK+F ++E K
Sbjct: 1033 CIEKFSCPETLDAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFLREQGRMGKCKR 1092
Query: 270 AVDMP 284
V+ P
Sbjct: 1093 TVNFP 1097
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 96 CLESFMREETIEQFFS-SALNKKVTAHKITRLATFPDYLLIQLKKFT-IKEDWTPAKLDV 269
C+E F ET++ KK K+ + P YL+I LK+F ++E K
Sbjct: 1036 CIEKFSCPETLDAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFLREQGRMGKCKR 1095
Query: 270 AVDMP 284
V+ P
Sbjct: 1096 TVNFP 1100
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 96 CLESFMREETIEQFFS-SALNKKVTAHKITRLATFPDYLLIQLKKFT-IKEDWTPAKLDV 269
C+E F ET++ KK K+ + P YL+I LK+F ++E K
Sbjct: 1033 CIEKFSCPETLDAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFLREQGRMGKCKR 1092
Query: 270 AVDMP 284
V+ P
Sbjct: 1093 TVNFP 1097
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 90 KACLESFMREETIE---QFFSSALNKKVTAHKITRLATFPDYLLIQLKKF 230
++CL+ F + T++ Q+ S V A K T+ P+ ++IQLK+F
Sbjct: 405 ESCLDRFFQNSTLQDDNQYSCSKCEVLVDATKSTKAHRLPEVIIIQLKRF 454
>U00065-3|AAK68286.3| 981|Caenorhabditis elegans Hypothetical
protein D1044.8 protein.
Length = 981
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = -2
Query: 406 SSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLRSTSQGMSTATSS 260
SS +S+TSSY G S+ SGS NP PRR S S G + SS
Sbjct: 754 SSLNSSTSSYKRPGRSSKTSGSGKLPPINPAPRR-NHSMSAGETPRPSS 801
>Z83220-1|CAB05700.2| 440|Caenorhabditis elegans Hypothetical
protein C34B7.1 protein.
Length = 440
Score = 31.1 bits (67), Expect = 0.50
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Frame = -2
Query: 427 STGNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLRSTSQ--------GMST 272
+TGN +S C +TS+ SA S C C R +RS +Q S
Sbjct: 303 NTGNLCNSQCTQDTSAVTCTECSAVNSDDCSGGTCQGRFCTFVRSKNQLDPTKSTVKKSC 362
Query: 271 ATSSFAGV-QSSLIVNFLSCIRR*SGNVASRVILCAVTF 158
AT+S +S N C + +G++ + + C +F
Sbjct: 363 ATTSILSFPDNSAYTNINHCQYKMAGSIQTAIKACNTSF 401
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 30.7 bits (66), Expect = 0.66
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +3
Query: 99 LESFMREETIE---QFFSSALNKKVTAHKITRLATFPDYLLIQLKKF 230
L +F++ E ++ Q+ K AHK R+ FP L IQLK+F
Sbjct: 254 LTAFVQPELLDGSNQYMCENCKSKQDAHKGLRITQFPYLLTIQLKRF 300
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 423 PGTPCRAVVTVILHRM*ELGCQRMPRAAASHQAATLV 313
PGTP R + L ++ ++GC + +SH+ TLV
Sbjct: 159 PGTPTRGRRSTHLFKLCDMGCSKSLSENSSHEMRTLV 195
>Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical
protein R107.4c protein.
Length = 816
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 423 PGTPCRAVVTVILHRM*ELGCQRMPRAAASHQAATLV 313
PGTP R + L ++ ++GC + +SH+ TLV
Sbjct: 159 PGTPTRGRRSTHLFKLCDMGCSKSLSENSSHEMRTLV 195
>Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical
protein R107.4b protein.
Length = 820
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 423 PGTPCRAVVTVILHRM*ELGCQRMPRAAASHQAATLV 313
PGTP R + L ++ ++GC + +SH+ TLV
Sbjct: 159 PGTPTRGRRSTHLFKLCDMGCSKSLSENSSHEMRTLV 195
>Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical
protein R107.4a protein.
Length = 754
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 423 PGTPCRAVVTVILHRM*ELGCQRMPRAAASHQAATLV 313
PGTP R + L ++ ++GC + +SH+ TLV
Sbjct: 159 PGTPTRGRRSTHLFKLCDMGCSKSLSENSSHEMRTLV 195
>AL110487-6|CAB54433.2| 472|Caenorhabditis elegans Hypothetical
protein Y39E4B.7 protein.
Length = 472
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = -2
Query: 412 MSSSCDSNTSSYVGAGVSADASGSCFS------SGCNPRPRRLLRSTSQGMSTATSSFAG 251
MSS CD + + G G A+A GS + G PRP LRS T + A
Sbjct: 352 MSSGCDESRITVGGGGGGAEADGSTCNLFEMERGGGTPRPNSSLRSARVHDETVDTPSAT 411
Query: 250 VQS 242
QS
Sbjct: 412 HQS 414
>Z98866-14|CAB11553.1| 524|Caenorhabditis elegans Hypothetical
protein Y49E10.17 protein.
Length = 524
Score = 28.3 bits (60), Expect = 3.5
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = -2
Query: 403 SCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLRSTSQGMSTATSSFAGVQSSLIVNF 224
SC S SS + + ++GS SSG + R +S G S+++ S + SS N
Sbjct: 88 SCTSLGSSNISSSSRQPSNGSFRSSGSSNGSSSSSRRSSNGSSSSSGSTSDNSSS---NI 144
Query: 223 LSCIRR*SGNVASR 182
S RR S N +SR
Sbjct: 145 SSSSRR-SSNGSSR 157
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -2
Query: 472 SMPELLV*YKDFLHA-STGNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLR 296
+M ++L +D + A +TG P + SN SS +GV + SGS + P + L
Sbjct: 282 TMIDVLAPVRDTVAAQATGLPNVGTSSSNGSSNSSSGVGSGGSGSLMTQSIG-GPNKHLS 340
Query: 295 STSQGMSTATS 263
++ ++TA++
Sbjct: 341 ASHSTLNTAST 351
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -2
Query: 472 SMPELLV*YKDFLHA-STGNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLR 296
+M ++L +D + A +TG P + SN SS +GV + SGS + P + L
Sbjct: 282 TMIDVLAPVRDTVAAQATGLPNVGTSSSNGSSNSSSGVGSGGSGSLMTQSIG-GPNKHLS 340
Query: 295 STSQGMSTATS 263
++ ++TA++
Sbjct: 341 ASHSTLNTAST 351
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -2
Query: 472 SMPELLV*YKDFLHA-STGNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLR 296
+M ++L +D + A +TG P + SN SS +GV + SGS + P + L
Sbjct: 282 TMIDVLAPVRDTVAAQATGLPNVGTSSSNGSSNSSSGVGSGGSGSLMTQSIG-GPNKHLS 340
Query: 295 STSQGMSTATS 263
++ ++TA++
Sbjct: 341 ASHSTLNTAST 351
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -2
Query: 472 SMPELLV*YKDFLHA-STGNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLR 296
+M ++L +D + A +TG P + SN SS +GV + SGS + P + L
Sbjct: 282 TMIDVLAPVRDTVAAQATGLPNVGTSSSNGSSNSSSGVGSGGSGSLMTQSIG-GPNKHLS 340
Query: 295 STSQGMSTATS 263
++ ++TA++
Sbjct: 341 ASHSTLNTAST 351
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -2
Query: 472 SMPELLV*YKDFLHA-STGNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLR 296
+M ++L +D + A +TG P + SN SS +GV + SGS + P + L
Sbjct: 282 TMIDVLAPVRDTVAAQATGLPNVGTSSSNGSSNSSSGVGSGGSGSLMTQSIG-GPNKHLS 340
Query: 295 STSQGMSTATS 263
++ ++TA++
Sbjct: 341 ASHSTLNTAST 351
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -2
Query: 472 SMPELLV*YKDFLHA-STGNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLR 296
+M ++L +D + A +TG P + SN SS +GV + SGS + P + L
Sbjct: 282 TMIDVLAPVRDTVAAQATGLPNVGTSSSNGSSNSSSGVGSGGSGSLMTQSIG-GPNKHLS 340
Query: 295 STSQGMSTATS 263
++ ++TA++
Sbjct: 341 ASHSTLNTAST 351
>Z49969-5|CAA90269.1| 224|Caenorhabditis elegans Hypothetical
protein W01C9.5 protein.
Length = 224
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = -2
Query: 298 RSTSQGMSTATSSFAGVQSSLIVNFLSCIRR*SGNVASRVILCAVTFLFKALLKNCSIVS 119
R S +S + + V S L + +S +RR ++ ++ ++ +T F L NC IVS
Sbjct: 4 RDRSGSISLSPRNVIPVCSQLTPSQVSVVRRSWRHINTKGLIIVLTRCFSRLESNCPIVS 63
Query: 118 SLMKLSKQALN 86
+ + +L+
Sbjct: 64 QCFQSATYSLS 74
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -2
Query: 472 SMPELLV*YKDFLHA-STGNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLR 296
+M ++L +D + A +TG P + SN SS +GV + SGS + P + L
Sbjct: 282 TMIDVLAPVRDTVAAQATGLPNVGTSSSNGSSNSSSGVGSGGSGSLMTQSIG-GPNKHLS 340
Query: 295 STSQGMSTATS 263
++ ++TA++
Sbjct: 341 ASHSTLNTAST 351
>AF025465-13|AAB71022.2| 142|Caenorhabditis elegans Hypothetical
protein K02E7.1a protein.
Length = 142
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 406 SSCDSNTSSYVGAGVSADASGSCFSSGCN 320
+SC S+ Y G+ AS S F SGCN
Sbjct: 12 NSCTSHPDRYSGSRSQFKASSSFFFSGCN 40
>Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical
protein C17E4.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +3
Query: 195 FPDYLLIQLKKFTIKEDWTPAKLDVAVDMPWEVDLS---SLRGRGLQPDEKQLPEA--SA 359
F Y++++LK K +K+ +D+ S S+ GR PD ++ PE +A
Sbjct: 43 FTHYIVLKLKNGQTKIKDKASKMGEILDVSSRASRSVDFSVSGRTKSPDSRKEPETAETA 102
Query: 360 DTPAPT 377
TP+P+
Sbjct: 103 KTPSPS 108
>U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical
protein B0222.1 protein.
Length = 285
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2
Query: 421 GNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLRSTSQGMSTATSSF 257
G SS S++SS+ + S+ +SGS FSS + RP S G + +S+F
Sbjct: 27 GGRGSSGARSSSSSFSSS--SSRSSGSSFSSSSSSRPTSGTSSYRSGNTQYSSNF 79
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = -2
Query: 421 GNPMSSSCDSNTSS---YVGAGVSADASGSCFSSGCNPRPRRLLRSTSQGMSTATSSFAG 251
G+ S ++++SS Y G G S+ + GS +SSG + +S G S+++SS +G
Sbjct: 333 GSSYSGGGEASSSSGGGYSGGGESSSSGGSSYSSGGDSSSSSGGGYSSGGDSSSSSSSSG 392
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = -2
Query: 421 GNPMSSSCDSNTSS---YVGAGVSADASGSCFSSGCNPRPRRLLRSTSQGMSTATSSFAG 251
G+ S ++++SS Y G G S+ + GS +SSG + +S G S+++SS +G
Sbjct: 333 GSSYSGGGEASSSSGGGYSGGGESSSSGGSSYSSGGDSSSSSGGGYSSGGDSSSSSSSSG 392
>AF106583-7|AAD03130.1| 299|Caenorhabditis elegans Hypothetical
protein F23C8.4 protein.
Length = 299
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 390 LLSQLLDMGFPVEACKKSLYYTNNSGIEAASNWL 491
+ QL+DMGFP + K NN ++ A +W+
Sbjct: 3 IAQQLMDMGFPAD--KAEAAAGNNRNLDQALDWI 34
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
protein C25D7.3 protein.
Length = 2150
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 81 IPFKACLESFMREETIEQFFSSALNKKVTAHKITRLATFPDYLLIQLKKFTIKE 242
+PF+ C+ +REE + S + V H R AT PD L++L K+ K+
Sbjct: 168 LPFEKCIRDVVREELKDPETSFSKPPSVVHHSKIRPAT-PD--LLKLAKYLGKD 218
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical protein
F07A11.4 protein.
Length = 1095
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 129 EQFFSSALNKKVTAHKITRLATFPDYLLIQLKKF 230
E ++ S + V A K +L P L+IQLK+F
Sbjct: 927 ESWYCSTCKENVEATKKLQLYRLPPVLIIQLKRF 960
>Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -2
Query: 430 ASTGNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLRSTSQGMSTATSSFA 254
+S P +SS +TSS + + + S S F NPR R + + A + A
Sbjct: 562 SSQHQPGTSSSGPSTSSSIASTPTPSTSNSLFDKSFNPRKSAKKREAREAAAVAPMTAA 620
>Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -2
Query: 430 ASTGNPMSSSCDSNTSSYVGAGVSADASGSCFSSGCNPRPRRLLRSTSQGMSTATSSFA 254
+S P +SS +TSS + + + S S F NPR R + + A + A
Sbjct: 562 SSQHQPGTSSSGPSTSSSIASTPTPSTSNSLFDKSFNPRKSAKKREAREAAAVAPMTAA 620
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
protein protein.
Length = 2150
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 81 IPFKACLESFMREETIEQFFSSALNKKVTAHKITRLATFPDYLLIQLKKFTIKE 242
+PF+ C+ +REE + S + V H R AT PD L++L K+ K+
Sbjct: 168 LPFEKCIRDVVREELKDPETSFSKPPSVVHHSKIRPAT-PD--LLKLAKYLGKD 218
>AF016445-1|AAC69057.2| 367|Caenorhabditis elegans Serpentine
receptor, class w protein132 protein.
Length = 367
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 358 LTPQLLHTMKYYCHNCSTW 414
L LLH +K Y CSTW
Sbjct: 112 LINSLLHQLKEYARRCSTW 130
>AC024832-7|AAL27257.1| 389|Caenorhabditis elegans Hypothetical
protein Y57E12AL.1b protein.
Length = 389
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 160 FLFKALLKNCSIVSSLMKLSKQALNGMCGLTTNAGSNLWPLASAWARLASYCW 2
F F L + ++ +L K + N + L +N S + S+W +A YCW
Sbjct: 325 FHFMFALASLYVMMTLTSWYKPS-NDLSHLNSNMASVWVKIVSSWVCVALYCW 376
>AC024832-6|AAL27256.1| 459|Caenorhabditis elegans Hypothetical
protein Y57E12AL.1a protein.
Length = 459
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 160 FLFKALLKNCSIVSSLMKLSKQALNGMCGLTTNAGSNLWPLASAWARLASYCW 2
F F L + ++ +L K + N + L +N S + S+W +A YCW
Sbjct: 395 FHFMFALASLYVMMTLTSWYKPS-NDLSHLNSNMASVWVKIVSSWVCVALYCW 446
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,745,514
Number of Sequences: 27780
Number of extensions: 306368
Number of successful extensions: 1093
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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