Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328A07f
(380 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK057478-1|BAB71504.1| 413|Homo sapiens protein ( Homo sapiens ... 31 0.94
AK027880-1|BAB55427.1| 1006|Homo sapiens protein ( Homo sapiens ... 31 0.94
AJ271459-1|CAC81055.1| 1088|Homo sapiens hypothetical protein pr... 31 0.94
AF222747-1|AAG44255.1| 1088|Homo sapiens RanBP17 protein. 31 0.94
EF432564-1|ABO31099.1| 475|Homo sapiens TBPP2A protein protein. 30 2.9
BC114620-1|AAI14621.1| 1756|Homo sapiens periplakin protein. 30 2.9
BC024193-1|AAH24193.1| 319|Homo sapiens TTC29 protein protein. 30 2.9
AK093145-1|BAC04072.1| 501|Homo sapiens protein ( Homo sapiens ... 30 2.9
AF345910-1|AAK29064.1| 466|Homo sapiens NYD-SP14 protein. 30 2.9
AF041004-1|AAD17459.1| 1756|Homo sapiens periplakin protein. 30 2.9
AF013717-1|AAC39668.1| 1756|Homo sapiens periplakin protein. 30 2.9
AF001691-1|AAC17738.1| 1756|Homo sapiens 195 kDa cornified envel... 30 2.9
AB011140-1|BAA25494.1| 1426|Homo sapiens KIAA0568 protein protein. 30 2.9
BC060786-1|AAH60786.1| 903|Homo sapiens development and differe... 28 8.7
AL357134-2|CAI22177.1| 903|Homo sapiens development and differe... 28 8.7
AL021154-1|CAI19596.1| 903|Homo sapiens development and differe... 28 8.7
AJ012755-1|CAA10171.1| 354|Homo sapiens TL132 protein protein. 28 8.7
AB056749-1|BAB85677.1| 903|Homo sapiens up-regulated in liver c... 28 8.7
>AK057478-1|BAB71504.1| 413|Homo sapiens protein ( Homo sapiens
cDNA FLJ32916 fis, clone TESTI2006483, moderately
similar to Homo sapiens RAN binding protein 16 mRNA. ).
Length = 413
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 237 ITVEPFVICYVLPSVLAGLAVQNMCLEKSCLVNLQY 130
I +EP V+ YVL S+ GL + + SC +L Y
Sbjct: 229 INLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDY 264
>AK027880-1|BAB55427.1| 1006|Homo sapiens protein ( Homo sapiens
cDNA FLJ14974 fis, clone THYRO1001347, moderately
similar to Homo sapiens RAN binding protein 16 mRNA. ).
Length = 1006
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 237 ITVEPFVICYVLPSVLAGLAVQNMCLEKSCLVNLQY 130
I +EP V+ YVL S+ GL + + SC +L Y
Sbjct: 822 INLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDY 857
>AJ271459-1|CAC81055.1| 1088|Homo sapiens hypothetical protein
protein.
Length = 1088
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 237 ITVEPFVICYVLPSVLAGLAVQNMCLEKSCLVNLQY 130
I +EP V+ YVL S+ GL + + SC +L Y
Sbjct: 904 INLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDY 939
>AF222747-1|AAG44255.1| 1088|Homo sapiens RanBP17 protein.
Length = 1088
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 237 ITVEPFVICYVLPSVLAGLAVQNMCLEKSCLVNLQY 130
I +EP V+ YVL S+ GL + + SC +L Y
Sbjct: 904 INLEPPVLMYVLTSISEGLTTLDTVVSSSCCTSLDY 939
>EF432564-1|ABO31099.1| 475|Homo sapiens TBPP2A protein protein.
Length = 475
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 280 FKGISKENMAVANENHRRTVC-DMLR 206
FKG+SKE +A ++++ +C DMLR
Sbjct: 49 FKGLSKEEVAAYRNSYKKNICVDMLR 74
>BC114620-1|AAI14621.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.9 bits (64), Expect = 2.9
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -3
Query: 327 KQYSKEIXTGNKLSRDLKESLKKIWRL---RTKITVEPFVICYVLPSVLAGLAVQNMCLE 157
+QY E R+ E L+KIW L K+ V+ V V P A V N+ LE
Sbjct: 1135 RQYEDEAAKARASQREKTELLRKIWALEEENAKVVVQEKVREIVRPDPKAESEVANLRLE 1194
Query: 156 KSCLVNLQYXEETCRHIMQGRHSELHRTRKK 64
LV + ++ SEL R++
Sbjct: 1195 ---LVEQERKYRGAEEQLRSYQSELEALRRR 1222
>BC024193-1|AAH24193.1| 319|Homo sapiens TTC29 protein protein.
Length = 319
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 280 FKGISKENMAVANENHRRTVC-DMLR 206
FKG+SKE +A ++++ +C DMLR
Sbjct: 49 FKGLSKEEVAAYRNSYKKNICVDMLR 74
>AK093145-1|BAC04072.1| 501|Homo sapiens protein ( Homo sapiens
cDNA FLJ35826 fis, clone TESTI2006437. ).
Length = 501
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 280 FKGISKENMAVANENHRRTVC-DMLR 206
FKG+SKE +A ++++ +C DMLR
Sbjct: 75 FKGLSKEEVAAYRNSYKKNICVDMLR 100
>AF345910-1|AAK29064.1| 466|Homo sapiens NYD-SP14 protein.
Length = 466
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -2
Query: 280 FKGISKENMAVANENHRRTVC-DMLR 206
FKG+SKE +A ++++ +C DMLR
Sbjct: 49 FKGLSKEEVAAYRNSYKKNICVDMLR 74
>AF041004-1|AAD17459.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.9 bits (64), Expect = 2.9
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -3
Query: 327 KQYSKEIXTGNKLSRDLKESLKKIWRL---RTKITVEPFVICYVLPSVLAGLAVQNMCLE 157
+QY E R+ E L+KIW L K+ V+ V V P A V N+ LE
Sbjct: 1135 RQYEDEAAKARASQREKTELLRKIWALEEENAKVVVQEKVREIVRPDPKAESEVANLRLE 1194
Query: 156 KSCLVNLQYXEETCRHIMQGRHSELHRTRKK 64
LV + ++ SEL R++
Sbjct: 1195 ---LVEQERKYRGAEEQLRSYQSELEALRRR 1222
>AF013717-1|AAC39668.1| 1756|Homo sapiens periplakin protein.
Length = 1756
Score = 29.9 bits (64), Expect = 2.9
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -3
Query: 327 KQYSKEIXTGNKLSRDLKESLKKIWRL---RTKITVEPFVICYVLPSVLAGLAVQNMCLE 157
+QY E R+ E L+KIW L K+ V+ V V P A V N+ LE
Sbjct: 1135 RQYEDEAAKARASQREKTELLRKIWALEEENAKVVVQEKVREIVRPDPKAESEVANLRLE 1194
Query: 156 KSCLVNLQYXEETCRHIMQGRHSELHRTRKK 64
LV + ++ SEL R++
Sbjct: 1195 ---LVEQERKYRGAEEQLRSYQSELEALRRR 1222
>AF001691-1|AAC17738.1| 1756|Homo sapiens 195 kDa cornified envelope
precursor protein.
Length = 1756
Score = 29.9 bits (64), Expect = 2.9
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -3
Query: 327 KQYSKEIXTGNKLSRDLKESLKKIWRL---RTKITVEPFVICYVLPSVLAGLAVQNMCLE 157
+QY E R+ E L+KIW L K+ V+ V V P A V N+ LE
Sbjct: 1135 RQYEDEAAKARASQREKTELLRKIWALEEENAKVVVQEKVREIVRPDPKAESEVANLRLE 1194
Query: 156 KSCLVNLQYXEETCRHIMQGRHSELHRTRKK 64
LV + ++ SEL R++
Sbjct: 1195 ---LVEQERKYRGAEEQLRSYQSELEALRRR 1222
>AB011140-1|BAA25494.1| 1426|Homo sapiens KIAA0568 protein protein.
Length = 1426
Score = 29.9 bits (64), Expect = 2.9
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -3
Query: 327 KQYSKEIXTGNKLSRDLKESLKKIWRL---RTKITVEPFVICYVLPSVLAGLAVQNMCLE 157
+QY E R+ E L+KIW L K+ V+ V V P A V N+ LE
Sbjct: 805 RQYEDEAAKARASQREKTELLRKIWALEEENAKVVVQEKVREIVRPDPKAESEVANLRLE 864
Query: 156 KSCLVNLQYXEETCRHIMQGRHSELHRTRKK 64
LV + ++ SEL R++
Sbjct: 865 ---LVEQERKYRGAEEQLRSYQSELEALRRR 892
>BC060786-1|AAH60786.1| 903|Homo sapiens development and
differentiation enhancing factor-like 1 protein.
Length = 903
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 227 STVIFVRNRHIFFRDSFKSRESLFP 301
S + F +H FF+D +K+ +SLFP
Sbjct: 214 SLIKFFHAQHNFFQDGWKAAQSLFP 238
>AL357134-2|CAI22177.1| 903|Homo sapiens development and
differentiation enhancing factor-like 1 protein.
Length = 903
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 227 STVIFVRNRHIFFRDSFKSRESLFP 301
S + F +H FF+D +K+ +SLFP
Sbjct: 214 SLIKFFHAQHNFFQDGWKAAQSLFP 238
>AL021154-1|CAI19596.1| 903|Homo sapiens development and
differentiation enhancing factor-like 1 protein.
Length = 903
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 227 STVIFVRNRHIFFRDSFKSRESLFP 301
S + F +H FF+D +K+ +SLFP
Sbjct: 214 SLIKFFHAQHNFFQDGWKAAQSLFP 238
>AJ012755-1|CAA10171.1| 354|Homo sapiens TL132 protein protein.
Length = 354
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 268 SKENMAVANENHRRTVCDMLRITECASRAGGSKYVPRKIVPSEPAVXRGN 119
SK+N+ + EN +C++ GGS+ P + P + V GN
Sbjct: 173 SKKNLDASKENGAEQICELADALSRGHMRGGSQ--PELVTPQDHEVALGN 220
>AB056749-1|BAB85677.1| 903|Homo sapiens up-regulated in liver
cancer 1 protein.
Length = 903
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 227 STVIFVRNRHIFFRDSFKSRESLFP 301
S + F +H FF+D +K+ +SLFP
Sbjct: 214 SLIKFFHAQHNFFQDGWKAAQSLFP 238
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,177,629
Number of Sequences: 237096
Number of extensions: 1009454
Number of successful extensions: 2235
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2235
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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