Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328A07f
(380 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 33 0.069
AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical ... 31 0.28
U97004-2|AAB52275.2| 218|Caenorhabditis elegans Hypothetical pr... 30 0.49
AF002198-7|AAF99935.1| 693|Caenorhabditis elegans Hypothetical ... 29 1.1
U28941-7|AAC71104.1| 330|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical p... 27 6.0
Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL023858-1|CAA19568.2| 328|Caenorhabditis elegans Hypothetical ... 27 6.0
AF039041-3|AAB94192.1| 183|Caenorhabditis elegans Hypothetical ... 26 7.9
AC103567-5|AAL35728.2| 337|Caenorhabditis elegans Hypothetical ... 26 7.9
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 33.1 bits (72), Expect = 0.069
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = -2
Query: 250 VANENHRRTVCDMLRITECASRAGGSKYVPRKIVPSEPAVXRGNLQAYNARTALRTTQNK 71
++ ENH + D++R T ++ GS YVP + E V + Q Y L +K
Sbjct: 645 ISRENHVKFTYDVMRDTYSHTQLNGSSYVPYNVANIERVVDKRLNQVY-----LHRNDSK 699
Query: 70 KKKFKEW 50
K + W
Sbjct: 700 KDTYLNW 706
>AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical
protein Y4C6B.5 protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 210 YVLPSVLAGLAVQNMCLEKSCLVNLQYXEETCRHI 106
Y+L S L QN+ EK CL+ Q E CR++
Sbjct: 17 YMLGSYLNYPVFQNLIYEKECLIKYQQNETFCRNV 51
>U97004-2|AAB52275.2| 218|Caenorhabditis elegans Hypothetical
protein R08E5.1 protein.
Length = 218
Score = 30.3 bits (65), Expect = 0.49
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 80 CSSECRPCIICLQVSSXYCRFTRHDFS 160
C +CRP ++C+ S+ Y RF D+S
Sbjct: 193 CHDQCRPDLVCIS-STQYVRFDAQDYS 218
>AF002198-7|AAF99935.1| 693|Caenorhabditis elegans Hypothetical
protein F35F10.10 protein.
Length = 693
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 250 VANENHRRTVCDMLRITECASRAGGSKYVPRKIVPSEPAVXRGNLQAYNARTAL 89
++ ENH + D++R ++ GS YVP + E V + Q Y R L
Sbjct: 518 ISRENHVKFTYDVMRDMYSHTKPNGSSYVPYNVENIERVVDKRLNQVYLHRNDL 571
>U28941-7|AAC71104.1| 330|Caenorhabditis elegans Hypothetical
protein F31D5.6 protein.
Length = 330
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = -3
Query: 318 SKEIXTGNKLSRDLKESLKKIWRLRTKITVEPFVICYVLPSVLAGLAVQNMCLEKSCLVN 139
+ +I G+ L+ +++ +I L+ T F +LP + ++NM L CL
Sbjct: 24 NNDIWVGDILAVGTNQAVIEIVALKNMSTCSTFEFWNLLPEEMKLECIKNMSLITRCL-- 81
Query: 138 LQYXEETCRHIMQGRHSELH 79
L+ +T R ++ + LH
Sbjct: 82 LRSTSQTERRLVNSQKIHLH 101
>Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical
protein AH6.1 protein.
Length = 1137
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +3
Query: 18 RGELQPT-HRSDHSLNFFFLFCVV 86
RG LQ R + S+++FF+FC++
Sbjct: 641 RGSLQDILSRGNFSMDYFFMFCII 664
>Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical
protein AH6.1 protein.
Length = 1137
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +3
Query: 18 RGELQPT-HRSDHSLNFFFLFCVV 86
RG LQ R + S+++FF+FC++
Sbjct: 641 RGSLQDILSRGNFSMDYFFMFCII 664
>Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical
protein R134.2 protein.
Length = 1118
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +3
Query: 18 RGELQPT-HRSDHSLNFFFLFCVV 86
RG LQ R + S+++FF+FC++
Sbjct: 642 RGSLQDILSRGNFSMDYFFMFCII 665
>AL023858-1|CAA19568.2| 328|Caenorhabditis elegans Hypothetical
protein ZK285.1 protein.
Length = 328
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 45 SDHSLNFFFLFCVVLSAVLALYACKFPRXTAGSLGTIFRGTY 170
+D +L F ++C ++++AC F G++ TIF+ Y
Sbjct: 82 ADGTLFFILIYCSCYGFSMSIFACHF-IYRYGNVNTIFKQKY 122
>AF039041-3|AAB94192.1| 183|Caenorhabditis elegans Hypothetical
protein W03F8.4 protein.
Length = 183
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 333 CNKQYSKEIXTGNKLSRDLKESLKKIWRLRTKITVEPFVI 214
C K++ +LS+ LKE +R ++ +EPFV+
Sbjct: 22 CRVCLFKDVKNAAELSQQLKEGKIDAALIRAELVLEPFVL 61
>AC103567-5|AAL35728.2| 337|Caenorhabditis elegans Hypothetical
protein Y51F10.10 protein.
Length = 337
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 165 CLEKSCLVNLQYXEETCRHIMQGRHSELHRT 73
CL KS LV+++Y + CR + + S + T
Sbjct: 250 CLPKSRLVHIEYYMKACRTVEKTGKSSIDET 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,712,559
Number of Sequences: 27780
Number of extensions: 166185
Number of successful extensions: 581
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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