Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328A06f
         (335 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.24 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   7.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   9.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   9.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 288 KKQIELHQIPIHYLPKSNYNDIIYACITLNN 196
           KK + L+Q     LP   YND+I   +T+ N
Sbjct: 439 KKVMNLYQQYQQSLPVYQYNDLILPGVTIQN 469


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 234 NYFSVNNELVFDV 272
           +YF + NELV +V
Sbjct: 243 DYFDIPNELVLEV 255


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/39 (20%), Positives = 22/39 (56%)
 Frame = +1

Query: 127 LHLTRSYASLIKIVAASNYSYLIIIKRNTCVNNIIIITF 243
           +++ R+   ++++ A+  YSYL +  +   +    ++TF
Sbjct: 273 VYVLRTKKGVMRVDASEEYSYLRLKGQMLYIPESDLVTF 311


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/39 (20%), Positives = 22/39 (56%)
 Frame = +1

Query: 127 LHLTRSYASLIKIVAASNYSYLIIIKRNTCVNNIIIITF 243
           +++ R+   ++++ A+  YSYL +  +   +    ++TF
Sbjct: 273 VYVLRTKKGVMRVDASEEYSYLRLKGQMLYIPESDLVTF 311


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,718
Number of Sequences: 438
Number of extensions: 1296
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)