Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328A02f
         (492 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23177-2|AAA64331.2|  538|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z79753-2|CAB02087.1|  249|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AF077542-1|AAC26295.2|  386|Caenorhabditis elegans Serpentine re...    29   1.8  
Z95619-3|CAB54269.1|  490|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z79753-1|CAB02086.1|  249|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...    27   7.4  

>U23177-2|AAA64331.2|  538|Caenorhabditis elegans Hypothetical
           protein C56G2.4 protein.
          Length = 538

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = +2

Query: 140 VTKQSYRVKVWRHLETNGLAVFPRPVYNRIPNFKGAQEAAAKLAELDVFK-NANTVKVNP 316
           +  + +RVK +       L +FPR  Y   P    A        E D F  N + V+ +P
Sbjct: 71  IASRLFRVKTYHSAYLRNLYIFPRVTYRASPGHYRA-------CEHDFFSGNTSAVQADP 123

Query: 317 D-KPQEPVRV 343
           D  P EP R+
Sbjct: 124 DMDPVEPFRI 133


>Z79753-2|CAB02087.1|  249|Caenorhabditis elegans Hypothetical
           protein F20G2.2 protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 62  AEIAKMQNGDGTPTAVDNTKKPLPEEVTKQSYRVKVWRHLETNGLA 199
           AE+ K+   DG    ++N    LP +V  +  R  + R LETN ++
Sbjct: 71  AEVEKLVGEDGLTVLLNNAGILLPYDVEGEKNRKTLIRQLETNSVS 116


>AF077542-1|AAC26295.2|  386|Caenorhabditis elegans Serpentine
           receptor, class w protein66 protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +3

Query: 81  RTETVRRQPWITPKSHCPKR*PSNRIASKYGVTSRRTGWQCSRAPYTTEFRTSKGLRR 254
           R E V  +PWI PK  C  + P N   S+Y  T  +   +  + P  T F    GL +
Sbjct: 179 RYEFVEVKPWIPPKK-C-SQFPPNYTVSEYMSTMAKAYSKADQTPLLTVFTILDGLSK 234


>Z95619-3|CAB54269.1|  490|Caenorhabditis elegans Hypothetical
           protein H21P03.3b protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 71  AKMQNGDGTPTAVDNTKKPLPEEVTKQSYRVKVWRHLETNGLA 199
           AKMQ+ +G     +N++    E+V KQ     V  H ET+G+A
Sbjct: 53  AKMQDDNGDEEKAENSEGAAAEKVEKQHDDDGVVVHEETDGVA 95


>Z79753-1|CAB02086.1|  249|Caenorhabditis elegans Hypothetical
           protein F20G2.1 protein.
          Length = 249

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +2

Query: 62  AEIAKMQNGDGTPTAVDNTKKPLPEEVTKQSYRVKVWRHLETNGLA 199
           AE+ K+   DG    ++N    +P ++  +  R  + R LETN ++
Sbjct: 71  AEVEKLVGEDGLTVLINNAGIFVPYDIDGEKSRSTLIRQLETNTIS 116


>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
 Frame = -3

Query: 457 FLMAAGPGSPSGQLQAVQEA---------GLEPWHRNVQSLLLFEAYHPNRLLRF 320
           F  A G  SPS   +AV E          GL+   R +Q L+ +   HP + L+F
Sbjct: 458 FRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKF 512


>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
 Frame = -3

Query: 457 FLMAAGPGSPSGQLQAVQEA---------GLEPWHRNVQSLLLFEAYHPNRLLRF 320
           F  A G  SPS   +AV E          GL+   R +Q L+ +   HP + L+F
Sbjct: 457 FRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKF 511


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 9/55 (16%)
 Frame = -3

Query: 457 FLMAAGPGSPSGQLQAVQEA---------GLEPWHRNVQSLLLFEAYHPNRLLRF 320
           F  A G  SPS   +AV E          GL+   R +Q L+ +   HP + L+F
Sbjct: 457 FRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKF 511


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,215,354
Number of Sequences: 27780
Number of extensions: 238014
Number of successful extensions: 864
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)