Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328A02f
(492 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 26 0.19
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 25 0.44
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 3.1
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 3.1
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 3.1
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 4.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.4
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 5.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 7.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 7.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 7.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 7.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 7.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.1
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 7.1
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 7.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 9.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 9.4
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 26.2 bits (55), Expect = 0.19
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 335 VRVICLEQQKTLYVPVPRLQTG 400
V V EQQ T++V +PR+Q G
Sbjct: 62 VDVYNTEQQSTVFVAIPRIQDG 83
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 25.0 bits (52), Expect = 0.44
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 387 GSRPAS*TAWSCPEGEPGPAAIRKAVSRXGMETL 488
G R AS + + CP +PG RK +++ +E +
Sbjct: 82 GEREASVSLF-CPRAKPGEKKFRKVITKAPLECM 114
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 1.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 163 DAIRLLGYLFGQWLFGVIHGCRRTVSVLHFSY 68
DAI LLG F +F V TV VL+F +
Sbjct: 320 DAIPLLGSYFNCIMFMVASSVVLTVLVLNFHH 351
Score = 22.2 bits (45), Expect = 3.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 330 SCGLSGLTFTVFAFLNT 280
SC + G+ F +F+FL T
Sbjct: 15 SCVIFGVLFVLFSFLRT 31
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 3.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 330 SCGLSGLTFTVFAFLNT 280
SC + G+ F +F+FL T
Sbjct: 15 SCVIFGVLFVLFSFLRT 31
Score = 21.8 bits (44), Expect = 4.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 163 DAIRLLGYLFGQWLFGVIHGCRRTVSVLHFSY 68
DA+ L+G F +F V TV VL+F +
Sbjct: 320 DAVPLIGSYFNCIMFMVASSVVLTVLVLNFHH 351
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.2 bits (45), Expect = 3.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 133 GQWLFGVIHGCRRTVSVLHF 74
GQ++ + CR+T +L+F
Sbjct: 266 GQYISDFVGSCRKTDQILYF 285
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.2 bits (45), Expect = 3.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 133 GQWLFGVIHGCRRTVSVLHF 74
GQ++ + CR+T +L+F
Sbjct: 304 GQYISDFVGSCRKTDQILYF 323
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 372 YKVFCCSRHITL 337
YK+FC +R I L
Sbjct: 223 YKIFCAARRIVL 234
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 163 DAIRLLGYLFGQWLFGVIHGCRRTVSVLHFSY 68
DAI LLG F +F V TV VL F +
Sbjct: 252 DAIPLLGSYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 163 DAIRLLGYLFGQWLFGVIHGCRRTVSVLHFSY 68
DAI LLG F +F V TV VL F +
Sbjct: 252 DAIPLLGSYFNCIMFMVASSVVLTVLVLIFHH 283
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 163 DAIRLLGYLFGQWLFGVIHGCRRTVSVLHFSY 68
DAI LLG F +F V TV VL F +
Sbjct: 252 DAIPLLGSYFNCIMFMVASSVVLTVLVLIFHH 283
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +3
Query: 78 CRTETVRRQPWITPKS 125
C+T + R+ W+T +S
Sbjct: 345 CKTRIIGRRSWVTRES 360
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 7.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 41 NFNDLNENHQNY 6
N+N+ N N+ NY
Sbjct: 93 NYNNYNNNYNNY 104
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.1
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 47 RFNFNDLNENHQNY 6
++N+N+ N N+ NY
Sbjct: 95 KYNYNNNNYNNNNY 108
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.1
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 47 RFNFNDLNENHQNY 6
++N+N+ N N+ NY
Sbjct: 95 KYNYNNNNYNNNNY 108
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 163 DAIRLLGYLFGQWLFGVIHGCRRTVSVLHFSY 68
DA+ LLG F +F V T+ +L++ +
Sbjct: 289 DAVPLLGTYFNCIMFMVASSVVSTILILNYHH 320
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.0 bits (42), Expect = 7.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 41 NFNDLNENHQNY 6
N+N+ N N+ NY
Sbjct: 326 NYNNYNNNYNNY 337
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 7.1
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 47 RFNFNDLNENHQNY 6
++N+N+ N N+ NY
Sbjct: 330 KYNYNNNNYNNNNY 343
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.0 bits (42), Expect = 7.1
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 430 PSGQLQAVQEAGLEPWHRNVQSLLLFEAYHPNR 332
P G L+ + +EPWH + + +L + + R
Sbjct: 71 PIGPLRFRKPLPIEPWHGVLNATVLPNSCYQER 103
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.0 bits (42), Expect = 7.1
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 430 PSGQLQAVQEAGLEPWHRNVQSLLLFEAYHPNR 332
P G L+ + +EPWH + + +L + + R
Sbjct: 71 PIGPLRFRKPLPIEPWHGVLNATVLPNSCYQER 103
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -1
Query: 411 RFRKPVWSRGTGTYKVFCCS 352
R + +W+RGT + CS
Sbjct: 431 RTEELIWARGTKDIPISACS 450
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -1
Query: 411 RFRKPVWSRGTGTYKVFCCS 352
R + +W+RGT + CS
Sbjct: 521 RTEELIWARGTKDIPISACS 540
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,129
Number of Sequences: 438
Number of extensions: 3076
Number of successful extensions: 23
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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