Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327H10f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   5.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   7.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   7.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   7.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.7  

>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 264 LVWYVCWNCVMTG 302
           LVW +C+ C+  G
Sbjct: 182 LVWILCYFCIWKG 194


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 405 SYGS*LPNWYFSILPQ 452
           SYG  LP+W  +I P+
Sbjct: 186 SYGLTLPSWTNNIFPR 201


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 405 SYGS*LPNWYFSILPQ 452
           SYG  LP+W  +I P+
Sbjct: 201 SYGLTLPSWTNNIFPR 216


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 405 SYGS*LPNWYFSILPQ 452
           SYG  LP+W  +I P+
Sbjct: 89  SYGLTLPSWTNNIFPK 104


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -1

Query: 437 KIPVGES*PIRPKTEYQKQXRKKEEPPRILV 345
           K+P  +  P+ P+++     R  E P  + V
Sbjct: 434 KLPHDDQPPLSPQSDSSSSSRSAESPMSVQV 464


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,890
Number of Sequences: 438
Number of extensions: 2598
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)