Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327H06f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF036690-1|AAB88323.1|  151|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical p...    27   8.1  

>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
           protein Y73F8A.5 protein.
          Length = 1019

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = -1

Query: 191 NKKLNTADXYRNLKKQSYIIKYTFTNCVAATMFITTSRVERDEKEKDG 48
           N+ L+     RN + QSY       N VA +MF+  ++ E+DE+EK+G
Sbjct: 179 NRALSMQVDIRNEQCQSY-------NDVAKSMFLKYTKKEKDEEEKNG 219


>AF036690-1|AAB88323.1|  151|Caenorhabditis elegans Hypothetical
           protein F09C11.1 protein.
          Length = 151

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 111 TVCKCIFYDIALFFK 155
           T  KCIFYD+ +FFK
Sbjct: 136 TTEKCIFYDLEIFFK 150


>Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical
           protein C01G12.8 protein.
          Length = 1049

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 211 FPKLXNPLRAIFVFRQVPIFLNDEGFTFYFVLKXNIGYQHIDII 342
           + KL N    +F + Q+       GFT YFVL  + G+   D++
Sbjct: 867 YDKLVNKRLVMFSYMQIGAIQACAGFTTYFVLMMSNGWFPQDLL 910


>Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical
           protein C01G12.8 protein.
          Length = 1049

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 211 FPKLXNPLRAIFVFRQVPIFLNDEGFTFYFVLKXNIGYQHIDII 342
           + KL N    +F + Q+       GFT YFVL  + G+   D++
Sbjct: 867 YDKLVNKRLVMFSYMQIGAIQACAGFTTYFVLMMSNGWFPQDLL 910


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,428,917
Number of Sequences: 27780
Number of extensions: 160417
Number of successful extensions: 221
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)