Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327H01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 111 3e-25
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 111 3e-25
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 79 2e-15
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 79 2e-15
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 77 1e-14
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 29 1.5
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical... 29 2.0
AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical ... 28 4.7
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 27 6.2
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 27 6.2
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 27 6.2
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 27 8.1
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 111 bits (267), Expect = 3e-25
Identities = 59/152 (38%), Positives = 93/152 (61%), Gaps = 5/152 (3%)
Frame = +2
Query: 68 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 241
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 242 -GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 418
ECRY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK S
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120
Query: 419 LVGVQK--YIQATDLSEASQEAVEEKLRATDR 508
L G++ +QA+++S+ +++V+ L + R
Sbjct: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 111 bits (267), Expect = 3e-25
Identities = 59/152 (38%), Positives = 93/152 (61%), Gaps = 5/152 (3%)
Frame = +2
Query: 68 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 241
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 242 -GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 418
ECRY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK S
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120
Query: 419 LVGVQK--YIQATDLSEASQEAVEEKLRATDR 508
L G++ +QA+++S+ +++V+ L + R
Sbjct: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 79.0 bits (186), Expect = 2e-15
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 18/160 (11%)
Frame = +2
Query: 68 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 205
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 206 -AEYEQFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 376
A +++F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118
Query: 377 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 493
KM+Y+SS A+K SL G Q +D SE S + + KL
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 79.0 bits (186), Expect = 2e-15
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 18/160 (11%)
Frame = +2
Query: 68 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 205
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 206 -AEYEQFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 376
A +++F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118
Query: 377 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 493
KM+Y+SS A+K SL G Q +D SE S + + KL
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 76.6 bits (180), Expect = 1e-14
Identities = 51/154 (33%), Positives = 85/154 (55%), Gaps = 18/154 (11%)
Frame = +2
Query: 68 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 205
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 206 -AEYEQFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 376
A +++F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118
Query: 377 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQE 475
KM+Y+SS A+K SL G Q +D SE S +
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHK 152
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +2
Query: 293 QCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEA 466
Q SE S K+ L++ CPD A V+++MLY+SS ALK SL G++ +QA+++S+
Sbjct: 142 QVSDESEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDL 197
Query: 467 SQEAVEEKLRATDR 508
+++V+ L + R
Sbjct: 198 DEKSVKSDLMSNQR 211
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 282 SKSNRPYLHSPVPPFCRSSRNCSYSALRSPTVST 181
S N P HSP PPF S N SY+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 282 SKSNRPYLHSPVPPFCRSSRNCSYSALRSPTVST 181
S N P HSP PPF S N SY+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 466 RFREVGRLDVLLNSDKGLFQSVERARVQHLLLD 368
RF E+G++D+ NS G+ + ++ V +LLD
Sbjct: 1828 RFLEIGKVDLSQNSSLGMAKLLDNVSVHGILLD 1860
>AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical
protein Y50D7A.10 protein.
Length = 138
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 296 CQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQE 475
C+ S+ + L+ +CP+ + + +MLY+ S + + V K + D+ E E
Sbjct: 74 CKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNE-CHVSKNTEIRDIDEIDDE 132
Query: 476 AVEEK 490
+E K
Sbjct: 133 LLESK 137
>AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical
protein Y48G1A.3 protein.
Length = 388
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 284 YTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLY 388
+ H G+ E + +F S PD+ K KKK+LY
Sbjct: 161 FIHSLCGSHEIHPVKIIFRFSKYPDSLKYKKKILY 195
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 506 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 414
+RWRG +PP PR S + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 506 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 414
+RWRG +PP PR S + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 506 DRWRGASLRRPPETLPRGRSLGCTSELRQGT 414
+RWRG +PP PR S + L +GT
Sbjct: 435 ERWRGRMRGKPPTPPPRESSASPVNSLPRGT 465
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 362 RCPGTTTSGRASVSC*PPTCPGTGACI 282
RC TT A V C CP ACI
Sbjct: 320 RCSAGTTCQEALVKCAKAPCPSHAACI 346
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 362 RCPGTTTSGRASVSC*PPTCPGTGACI 282
RC TT A V C CP ACI
Sbjct: 385 RCSAGTTCQEALVKCAKAPCPSHAACI 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,653,181
Number of Sequences: 27780
Number of extensions: 209804
Number of successful extensions: 853
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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