Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327G08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70854-14|AAB09153.1|   81|Caenorhabditis elegans Nematode speci...    30   1.2  
U70854-13|AAB09152.1|   82|Caenorhabditis elegans Nematode speci...    27   8.1  
U70854-11|AAB09149.1|   82|Caenorhabditis elegans Nematode speci...    27   8.1  
U70854-9|AAB09156.1|   82|Caenorhabditis elegans Nematode specif...    27   8.1  
U70854-8|AAQ01533.2|   82|Caenorhabditis elegans Nematode specif...    27   8.1  

>U70854-14|AAB09153.1|   81|Caenorhabditis elegans Nematode specific
           peptide family,group b protein 5 protein.
          Length = 81

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 350 PLVTAPYGIAA-PYGIAAPYTAYGAYGVAPYSLGVHAW 460
           P+V++PY  A+ P   A PY AY AYG A Y    + W
Sbjct: 25  PVVSSPYYYASSPVASAYPY-AY-AYGAAAYPTAYYGW 60


>U70854-13|AAB09152.1|   82|Caenorhabditis elegans Nematode specific
           peptide family,group b protein 4 protein.
          Length = 82

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 353 LVTAPYGIAA-PYGIAAPYTAYGAYGVAPYSLGVHAW 460
           +V++PY  A+ P   A PY AY AYG A Y    + W
Sbjct: 27  VVSSPYYYASSPVASAYPY-AY-AYGAAAYPTAYYGW 61


>U70854-11|AAB09149.1|   82|Caenorhabditis elegans Nematode specific
           peptide family,group b protein 3 protein.
          Length = 82

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 353 LVTAPYGIAA-PYGIAAPYTAYGAYGVAPYSLGVHAW 460
           +V++PY  A+ P   A PY AY AYG A Y    + W
Sbjct: 27  VVSSPYYYASSPVASAYPY-AY-AYGAAAYPTAYYGW 61


>U70854-9|AAB09156.1|   82|Caenorhabditis elegans Nematode specific
           peptide family,group b protein 2 protein.
          Length = 82

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 353 LVTAPYGIAA-PYGIAAPYTAYGAYGVAPYSLGVHAW 460
           +V++PY  A+ P   A PY AY AYG A Y    + W
Sbjct: 27  VVSSPYYYASSPVASAYPY-AY-AYGAAAYPTAYYGW 61


>U70854-8|AAQ01533.2|   82|Caenorhabditis elegans Nematode specific
           peptide family,group b protein 1 protein.
          Length = 82

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 353 LVTAPYGIAA-PYGIAAPYTAYGAYGVAPYSLGVHAW 460
           +V++PY  A+ P   A PY AY AYG A Y    + W
Sbjct: 27  VVSSPYYYASSPVASAYPY-AY-AYGAAAYPTAYYGW 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,024,611
Number of Sequences: 27780
Number of extensions: 44962
Number of successful extensions: 161
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)