Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327G06f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0837 - 32328191-32328369,32328682-32328731,32328844-323289... 131 4e-31
06_03_0934 - 26073084-26073220,26073296-26073345,26073465-260736... 130 7e-31
10_08_0605 + 19158167-19158309,19158726-19158834,19159099-191592... 72 2e-13
10_08_0607 + 19168164-19168358,19168594-19168716,19168791-191689... 68 4e-12
08_01_0889 + 8753877-8754236,8754995-8755054,8755174-8755250,875... 31 0.56
06_02_0322 + 14369221-14369540,14370240-14370918,14371347-143715... 30 0.98
01_01_0633 - 4767914-4768020,4768057-4768085,4768590-4768745,476... 29 2.3
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 29 3.0
03_01_0492 - 3724798-3724944,3725118-3725223,3726573-3726664,372... 27 9.1
02_02_0501 - 10999203-10999754,11000724-11001460,11001461-110018... 27 9.1
02_02_0299 - 8726024-8726101,8726460-8726534,8726836-8726965,872... 27 9.1
>01_06_0837 -
32328191-32328369,32328682-32328731,32328844-32328923,
32329193-32329345,32329505-32329654,32329877-32330000,
32330086-32330198,32330287-32330420,32330566-32331232
Length = 549
Score = 131 bits (316), Expect = 4e-31
Identities = 70/163 (42%), Positives = 99/163 (60%), Gaps = 4/163 (2%)
Frame = +1
Query: 43 EHRYYGESKPFGNKSL---EKEYIGYLTSAQALADYADLINYLQKDEIKPRYPVIAFGGS 213
+HRYYGES PFG+K + + YLT+ QALADYA L+ L+K+ PV+ FGGS
Sbjct: 160 QHRYYGESMPFGSKDKAYNNSKSLAYLTAEQALADYAVLLTDLKKNLSSEGSPVVLFGGS 219
Query: 214 YGGMLAAYIRIKYPHLVAGAIAASAPIHMFPGMTKCDLFNRIVTASFKR-NFYCSENIQK 390
YGGMLAA++R+KYPH+ GA+A+SAPI F + +F +V+ FKR + C + I+
Sbjct: 220 YGGMLAAWMRLKYPHIAVGALASSAPILQFEDVVPSTIFYDLVSNDFKRESLSCFQTIKD 279
Query: 391 SWHLIRSYSSSVNGSEYLHKTLNLCGASNATDIXSLIEYLESA 519
SW + + + +G L KT +LC T L ++L SA
Sbjct: 280 SWKALDAQGNGQDGLLKLSKTFHLCKTIKNT--GELSDWLSSA 320
>06_03_0934 -
26073084-26073220,26073296-26073345,26073465-26073634,
26073651-26073803,26073877-26074032,26074227-26074350,
26075066-26075178,26076336-26076469,26077391-26077578,
26077718-26078139
Length = 548
Score = 130 bits (314), Expect = 7e-31
Identities = 68/143 (47%), Positives = 89/143 (62%), Gaps = 2/143 (1%)
Frame = +1
Query: 43 EHRYYGESKPFGNKSLEK-EYIGYLTSAQALADYADLINYLQKDEIKPRYPVIAFGGSYG 219
+HR+YGESKPFGN+S E +GYLTS QALAD+A LI L+ + PV+ FGGSYG
Sbjct: 143 QHRFYGESKPFGNESNSSPEKLGYLTSTQALADFAVLITSLKHNLSAVSSPVVVFGGSYG 202
Query: 220 GMLAAYIRIKYPHLVAGAIAASAPIHMFPGMTKCDLFNRIVTASFK-RNFYCSENIQKSW 396
GMLA++ R+KYPH+ GA+A+SAPI F +T F V+ +K +F C I+ +W
Sbjct: 203 GMLASWFRLKYPHVTIGAVASSAPILQFDYITPWSSFYEAVSQDYKSESFNCFSVIKAAW 262
Query: 397 HLIRSYSSSVNGSEYLHKTLNLC 465
LI S+ G L KT C
Sbjct: 263 DLIDERGSTDAGLLQLSKTFRAC 285
>10_08_0605 +
19158167-19158309,19158726-19158834,19159099-19159224,
19159388-19159543,19159623-19159805,19159904-19160020,
19160528-19160581,19160661-19160732,19160947-19161058,
19161188-19161284,19161434-19161528,19162093-19162167,
19162307-19162390,19162602-19162700,19163167-19163207
Length = 520
Score = 72.1 bits (169), Expect = 2e-13
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Frame = +1
Query: 16 EYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKDEIKPRY-- 189
++ A +V EHRYYG+S PF +SL E + +L+S QAL D A Y Q + + +Y
Sbjct: 131 KFGAAVVSPEHRYYGKSSPF--ESLTTENLRFLSSKQALFDLAVFRQYYQ-ETLNAKYNR 187
Query: 190 -----PVIAFGGSYGGMLAAYIRIKYPHLVAGAIAASAPI 294
FGGSY G L+A+ R+K+PHL G++A+S +
Sbjct: 188 SGADSSWFVFGGSYAGALSAWFRLKFPHLTCGSLASSGVV 227
>10_08_0607 +
19168164-19168358,19168594-19168716,19168791-19168946,
19169129-19169314,19169467-19169583,19169721-19169774,
19169854-19169925,19170430-19170535,19170658-19170754,
19171090-19171184,19172318-19172420,19172699-19172886,
19174928-19175183,19177187-19177325
Length = 628
Score = 68.1 bits (159), Expect = 4e-12
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Frame = +1
Query: 16 EYQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKDEIKPRY-- 189
++ A +V EHRYYG+S PF +SL E + +L+S QAL D + Q + + RY
Sbjct: 111 KFGAAVVTPEHRYYGKSSPF--ESLTTENLRFLSSKQALFDLVAFRQHYQ-EILNARYNR 167
Query: 190 ------PVIAFGGSYGGMLAAYIRIKYPHLVAGAIAASAPI 294
P FG SY G L+A+ R+K+PHL G++A+S +
Sbjct: 168 SSGFDNPWFVFGVSYSGALSAWFRLKFPHLTCGSLASSGVV 208
>08_01_0889 +
8753877-8754236,8754995-8755054,8755174-8755250,
8755481-8755622,8755736-8755772,8755852-8755921,
8756021-8756212,8756321-8756413,8756545-8756773,
8756861-8756944,8757041-8757192,8757279-8757375,
8757576-8757725,8757813-8757890,8757982-8758104,
8758169-8758315,8758418-8758472,8758807-8758874
Length = 737
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 19 YQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKDEI 177
Y + F H + P G SL + +T ALA YADL+N +K +
Sbjct: 371 YSPEAFFTIHADKEDGTPLGGGSLAPPFPSPITVRNALARYADLLNSPKKSAL 423
>06_02_0322 +
14369221-14369540,14370240-14370918,14371347-14371573,
14372121-14372312,14372394-14372550,14373860-14374093
Length = 602
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 190 PVIAFGGSYGGMLAAYIRIKYPHLVAGAIAASA 288
PV G S GG ++ Y+ PHLV G +A
Sbjct: 338 PVYIVGNSLGGFVSLYLAASCPHLVKGVTLLNA 370
>01_01_0633 -
4767914-4768020,4768057-4768085,4768590-4768745,
4768835-4768983,4769106-4769638,4769900-4770068,
4770255-4770347,4770641-4770698,4771392-4771471,
4771548-4771715,4772090-4772242,4772756-4772884,
4772996-4773085,4773990-4774129,4774683-4774814,
4774916-4775087
Length = 785
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 325 LFNRIVTASFKRNFYCSENIQKSWHLIRSYSSSVNGSEYLH 447
LF ++ KRN N ++HL+R+Y++ ++H
Sbjct: 601 LFRLVILEGQKRNIIYGSNGMSAFHLVRNYNTHAPEHSWIH 641
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 243 DKVSPPSGRSYSRLSSHTHVSRNDEVRSLQ*DRNGQF 353
D+++ GRSY+ + H +S+N R+L R+G+F
Sbjct: 364 DRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRF 400
>03_01_0492 -
3724798-3724944,3725118-3725223,3726573-3726664,
3727238-3727276,3727491-3727847
Length = 246
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/53 (22%), Positives = 23/53 (43%)
Frame = +2
Query: 26 PRLFSQSTDIMESPSLLVTSPWKKSTLGTSRQPRHWLTMPTSSITFKKMKSNP 184
PR + S++ P ++ W+K+ R P W ++ F+K+ P
Sbjct: 52 PRPSASSSEPRSFPYVVKQRCWEKAERVAGRDPERWRRDALGNVVFRKLVGCP 104
>02_02_0501 -
10999203-10999754,11000724-11001460,11001461-11001836,
11001917-11001946,11002718-11002912,11003604-11004149
Length = 811
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 160 LQKDEIKPRYPVIAFGGSYGGMLAAYIRIKYPHLVAGAIAASAPIHMFPG 309
++K KP + + +G SYGG L+A ++P + A+ + AP+ + G
Sbjct: 665 IKKGLAKPGH-IGLYGWSYGGFLSAMCLARFPDTFSCAV-SGAPVTAWDG 712
>02_02_0299 -
8726024-8726101,8726460-8726534,8726836-8726965,
8727406-8727601,8727894-8727965,8728087-8728159,
8728240-8728344,8728502-8728624,8728730-8728806,
8729064-8729108,8729214-8729433
Length = 397
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = +1
Query: 19 YQAKIVFAEHRYYGESKPFGNKSLEKEYIGYLTSAQALADYADLINYLQKDEIKPRYPVI 198
YQ K + E + ES +G K L + I LT A Y ++I +L I V+
Sbjct: 101 YQGKSPYQEVLVF-ESSTYG-KVLVLDGIVQLTDKDECA-YQEMITHLPLCSIPSPKKVL 157
Query: 199 AFGGSYGGMLAAYIR 243
GG GG+L R
Sbjct: 158 VIGGGDGGVLREICR 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,333,597
Number of Sequences: 37544
Number of extensions: 302202
Number of successful extensions: 783
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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