Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327G02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical p...    69   3e-12
Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical pr...    69   3e-12
Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical pr...    69   3e-12

>Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical
           protein F28C6.7c protein.
          Length = 109

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = +1

Query: 1   KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQV 168
           K N  V+S   K+RK HF+APSH RR +MS+PL+KELR K  ++++PIR DDEV V
Sbjct: 2   KVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVV 57


>Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical
           protein F28C6.7b protein.
          Length = 106

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = +1

Query: 1   KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQV 168
           K N  V+S   K+RK HF+APSH RR +MS+PL+KELR K  ++++PIR DDEV V
Sbjct: 2   KVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVV 57


>Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical
           protein F28C6.7a protein.
          Length = 142

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = +1

Query: 1   KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQV 168
           K N  V+S   K+RK HF+APSH RR +MS+PL+KELR K  ++++PIR DDEV V
Sbjct: 2   KVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVV 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,425,832
Number of Sequences: 27780
Number of extensions: 263397
Number of successful extensions: 563
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)