Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327F04f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 0.73
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 28 0.73
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 28 0.73
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 27 1.3
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 2.2
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 26 3.0
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 25 5.2
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 25 5.2
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3... 25 5.2
SPCC965.10 |||transcription factor |Schizosaccharomyces pombe|ch... 25 6.8
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 25 6.8
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 25 6.8
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 25 6.8
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 25 9.0
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 25 9.0
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 9.0
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 0.73
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = -3
Query: 243 DPASSTPTPTSLMLCCLRIGAISLNSLAQSLQNMQPQRRKNTIATFCCSQKLFNSKTS 70
D + P P + C L N L N++ RR N +A + S +F K S
Sbjct: 778 DASYDNPDPQHKVSCTLECSQQQRNKLFAEALNIKTDRRSNDVAQYTKSLLVFYGKHS 835
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 28.3 bits (60), Expect = 0.73
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -3
Query: 282 RSPSKNFPSLNSLDPASSTPTPTSLMLCC--LRIGAISLNSLAQSLQNMQPQRRKNTIAT 109
+ PS+ P +D +++ T +L+LC L ++ S Q L N+ +KNT+
Sbjct: 732 KPPSQTEPDNKKVDVSTTLSTNDNLVLCWRDLNFTVVTKTSKKQILTNVSGYLKKNTLTA 791
Query: 108 FCCSQK 91
K
Sbjct: 792 LLGENK 797
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 28.3 bits (60), Expect = 0.73
Identities = 21/91 (23%), Positives = 42/91 (46%)
Frame = +2
Query: 143 MFCRLWAKELSEIAPILKQHNIKLVGVGVEEAGSKEFSEGKFFDGDLYYVENISTYQQLG 322
+F W K E + + + +G G++E +E+ + D ++ENI+
Sbjct: 92 LFDTEWIKNFHEGSHDKAEKRLVSIGKGLKEFLPEEWLLSRL---DCKFLENINVVPNGD 148
Query: 323 FKRFNILTILTSLLWKQSRDAISKGKAMGLS 415
F I+ TSLL++Q + + + ++ G S
Sbjct: 149 FLNRKIVRTNTSLLYRQKKFNLLREESEGFS 179
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = -3
Query: 306 VEMFST*YRSPSKNFPSLNSLDPASSTPTPTSLMLCCLRIGAISLNSLAQSLQNMQ 139
VE T + SL D + TP P+ L L+ GA S +QSL+NM+
Sbjct: 221 VEKLKTSASKQAAEAQSLREFDFFTPTPEPSDKNLEKLKNGASKQASESQSLKNME 276
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 26.6 bits (56), Expect = 2.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 183 AISLNSLAQSLQNMQPQRRKNTIATFCCSQKLFNSKTSPLET-FLTFCVP 37
A +L+S + N RR A+ CC QKL K L T FLT +P
Sbjct: 166 ARALSSALDIIPNKNSSRRLQ-FASLCCVQKLICPKQYRLPTEFLTTFLP 214
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 26.2 bits (55), Expect = 3.0
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -3
Query: 282 RSPSKNFPSLNSLDPASSTPTPTSLMLCCLRIGAISLNSLAQSLQNMQPQRRKNTI 115
++P K+ SLN + P+SSTPTP S++ S +S+ + +KN +
Sbjct: 606 KTPEKD-RSLN-VTPSSSTPTPASVLAPPSSASLSSSKDANRSVPESPRREKKNRV 659
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 101 QQNVAIVFFRRWGCMFCRLWAKELSEIAPILKQHNIKLVG 220
++ I F+ W C C+ A E+ + + HN L+G
Sbjct: 39 KKGALIEFYATW-CGHCKSLAPVYEELGALFEDHNDVLIG 77
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 178 FAQLFSPKPTKHATPATK 125
F++LF PKP K A P K
Sbjct: 191 FSELFKPKPVKLAPPKKK 208
>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 555
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 313 LIS*NVLDVIQISIEKLSFAELLGSGLFDANPDKFDVVLLE 191
L+S + V+ + L +++ G L+D +KFD+ LLE
Sbjct: 183 LVSNFLASVLLQTEAPLDISDVCGMNLWDIQNEKFDIRLLE 223
>SPCC965.10 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 25.0 bits (52), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 131 RWGCMFCRLWAKELSEIAP 187
R+GC+ CR K+ E+ P
Sbjct: 18 RYGCLICRSMRKKCDEVHP 36
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 2 QKLKMSPDINQIGTQKVRNVSSGEVLELKSFWEQQNVAIVFFRRW 136
Q + ++ Q Q + S G LEL F+E+ ++ +RW
Sbjct: 104 QSYETPDELQQAAKQFYQLASKGIGLELALFYEEYGSLLIRMQRW 148
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 393 FEIASRDCFHSSEVKIVKILNLLKPNC 313
+EI+ D F EVK+ N L P C
Sbjct: 124 YEISLEDMFKGKEVKLRATRNTLCPRC 150
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 25.0 bits (52), Expect = 6.8
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +2
Query: 209 KLVGVGVEEAGSKEFSEGKFFDGDLYYVENISTYQQLGFKRFNILTILTSLLWKQSRDAI 388
KL + V + K G FDG + ++NI LG +TIL+ + +++ D +
Sbjct: 355 KLFALAVRQISHKTKRPG--FDGIINSLKNIFEEDNLGKTSLKCVTILSRMFKQRNYDVL 412
Query: 389 SKGKAMGLSGDMKGD 433
+ LS ++ D
Sbjct: 413 PDVYDLFLSVNILND 427
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 272 DGDLYYVENISTYQQLGFKRFNILTILTS 358
DG YY TY+++GF N T LT+
Sbjct: 159 DGSHYYAALRETYEEIGFLP-NFFTYLTT 186
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 24.6 bits (51), Expect = 9.0
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 34 DRHAKSEKRFQWRSFR 81
D H+ +E F W++FR
Sbjct: 19 DNHSNNESNFTWKAFR 34
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 192 SSSTTSNLSGLASKRPDPRSSAKESFSMEICITSRT 299
SSS++S+ S +S SS+ S S + ITS T
Sbjct: 179 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSST 214
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,279,624
Number of Sequences: 5004
Number of extensions: 46477
Number of successful extensions: 201
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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