Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327C07f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0079 + 644754-645932,645966-646061,646193-647122                 34   0.080
11_01_0078 + 609005-610183,610217-610312,610444-611373                 34   0.080
11_06_0760 + 27017956-27018433,27018487-27019234,27023760-270243...    29   1.7  
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815...    29   1.7  
05_03_0513 + 14919136-14920881                                         29   2.3  
02_05_1056 - 33804717-33804871,33805352-33805418,33805508-338055...    27   6.9  
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313...    27   9.1  

>12_01_0079 + 644754-645932,645966-646061,646193-647122
          Length = 734

 Score = 33.9 bits (74), Expect = 0.080
 Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
 Frame = -1

Query: 479 QAAQSRVEKVRQLREQKKIA---KRVQIDTKLKQAAEKKQMLEQLKRVRKGKA 330
           +A +SRVEK ++  E+K++A   K +  + + KQ  E  +++E+ +R+R  KA
Sbjct: 205 KAEESRVEKAKRKAEEKRLARLEKEMLEEEERKQREEMAKLVEERRRLRDEKA 257


>11_01_0078 + 609005-610183,610217-610312,610444-611373
          Length = 734

 Score = 33.9 bits (74), Expect = 0.080
 Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
 Frame = -1

Query: 479 QAAQSRVEKVRQLREQKKIA---KRVQIDTKLKQAAEKKQMLEQLKRVRKGKA 330
           +A +SRVEK ++  E+K++A   K +  + + KQ  E  +++E+ +R+R  KA
Sbjct: 205 KAEESRVEKAKRKAEEKRLARLEKEMLEEEERKQREEMAKLVEERRRLRDEKA 257


>11_06_0760 +
           27017956-27018433,27018487-27019234,27023760-27024378,
           27030755-27032440
          Length = 1176

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
 Frame = -1

Query: 482 KQAAQSRVEKVRQLREQK--KIAKRVQIDTKLKQAAEKKQMLEQLKRVRKGKASDLD 318
           K+    R+ KV  LR +K  K+   V+ ++++ +  E+K++ +  ++ R+G+  ++D
Sbjct: 453 KRKESDRIHKVDVLRGKKPEKLFNEVESESRISKDGERKEIDDGEQKEREGQQKEID 509


>01_06_0213 +
           27580635-27581105,27581206-27581298,27581376-27581540,
           27581640-27581862,27582329-27582429,27582666-27582713,
           27583086-27583172,27583745-27583879,27583985-27584140,
           27585336-27585545,27585641-27586351,27586429-27586974,
           27587872-27588495,27588595-27588699,27590460-27590711,
           27590939-27591766
          Length = 1584

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/46 (30%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = -1

Query: 467 SRVEKVRQLREQKKIAKRVQI-DTKLKQAAEKKQMLEQLKRVRKGK 333
           SRV++ R+  E+ KIAK V+  + ++++  EK+ M+++ +  +  K
Sbjct: 150 SRVDRKRKHNEEAKIAKEVEAHERRIRKELEKQDMMKRKREEQMRK 195


>05_03_0513 + 14919136-14920881
          Length = 581

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = -1

Query: 497 KXLMAKQAAQSRVEKVRQL-REQKKIAKRVQIDTKLKQAAEKKQMLEQLKRVRKGKASDL 321
           K L+A++AA    E    + R Q++   R++++ K  +  E+K   EQL+ + +      
Sbjct: 474 KKLIAERAASPNTEMQELIARAQERQKLRLELERKTARELERKMAREQLQEMERTARPVY 533

Query: 320 DFLD 309
           D +D
Sbjct: 534 DSID 537


>02_05_1056 -
           33804717-33804871,33805352-33805418,33805508-33805576,
           33806414-33806548,33806609-33806680,33807281-33807375,
           33807778-33807859,33807949-33807999,33808107-33808187,
           33808534-33808575,33808705-33808803,33809044-33809115,
           33809166-33809270
          Length = 374

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 482 KQAAQSRVEKVRQLREQKKIAKRVQIDTKLKQAAEKKQMLE 360
           K   ++  E +RQ+  +KK A+      K+K AA K+ +LE
Sbjct: 333 KTFERAHAENLRQMELEKKRAQMEAEKEKVKAAAHKEDLLE 373


>02_03_0351 +
           18030656-18030823,18030963-18031113,18031214-18031309,
           18032027-18032103,18032627-18032706,18033216-18033276,
           18034153-18034220,18034312-18034393,18034552-18034638,
           18035009-18035086,18035336-18035455,18035554-18035730
          Length = 414

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 17/60 (28%), Positives = 37/60 (61%)
 Frame = -1

Query: 518 EXMQKVRKXLMAKQAAQSRVEKVRQLREQKKIAKRVQIDTKLKQAAEKKQMLEQLKRVRK 339
           E  ++ RK    K+  + R+E+ R+ +E+ +I K +    ++++  E+K+M+E L+R+ K
Sbjct: 189 ELRERARKK---KEEEERRMERERE-KERIRIGKELLEAKRIEEDNERKRMIE-LRRLEK 243


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,318,539
Number of Sequences: 37544
Number of extensions: 132283
Number of successful extensions: 301
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)