Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327C04f
         (490 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679...   137   4e-33
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...   136   9e-33
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871...    28   4.6  
04_04_1146 + 31249488-31249722,31250145-31250236,31251158-312512...    27   6.1  
06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089     27   8.1  
01_06_1261 - 35826513-35828941,35829201-35829294                       27   8.1  

>01_06_1660 +
           38966999-38967001,38967685-38967757,38967841-38967923,
           38968042-38968168,38968260-38968339,38968428-38968544,
           38968711-38968845,38969046-38969215,38969300-38969417
          Length = 301

 Score =  137 bits (332), Expect = 4e-33
 Identities = 66/141 (46%), Positives = 98/141 (69%)
 Frame = -3

Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
           TG RVFGA+KGA+DGGL++PHS KRF G+  + K+ ++++HR +I+G HVA+YMRS+ ++
Sbjct: 152 TGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEE 211

Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
           + + F+  FS+Y+K G+ AD +EA+YKK H AIRADP+             KR+N +KLT
Sbjct: 212 EPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPT-MAKSTKKEPATHKRYNLKKLT 270

Query: 125 LAERKNRIKQKKASFIKRLQA 63
                   +Q+KAS ++RL A
Sbjct: 271 -------YEQRKASLVERLNA 284


>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score =  136 bits (329), Expect = 9e-33
 Identities = 65/141 (46%), Positives = 98/141 (69%)
 Frame = -3

Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
           TG RVFGA+KGA+DGGL++PHS KRF G+  + K+ ++++HR +I+G HVA+YMRS+ ++
Sbjct: 152 TGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEE 211

Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
           + + F+  FS+Y+K G+ AD +E++YKK H AIRADP+             KR+N +KLT
Sbjct: 212 EPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPT-MAKSTKKEPATHKRYNLKKLT 270

Query: 125 LAERKNRIKQKKASFIKRLQA 63
                   +Q+KAS ++RL A
Sbjct: 271 -------YEQRKASLVERLNA 284


>02_04_0562 -
           23886272-23886357,23886456-23886571,23887045-23887127,
           23887683-23887829,23887946-23887993,23888166-23888384,
           23889370-23889541,23889636-23889700,23890386-23890512,
           23891358-23891450,23891520-23891629,23891722-23891868,
           23892161-23892473,23892580-23893178
          Length = 774

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 195 IPQEERVKERLGQTEALEQTQANIGREEKQNQAKE 91
           +P E+ V ER  + E LE  +  I  EEK+ + +E
Sbjct: 518 LPSEDSVSERRRKLEFLEMQEELIKEEEKKKEKEE 552


>04_04_1146 +
           31249488-31249722,31250145-31250236,31251158-31251209,
           31251377-31251477,31251587-31252020,31252453-31252507,
           31252614-31252667,31252774-31253190
          Length = 479

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -3

Query: 449 VDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRS-LEQDDEDSFKRQFSK 273
           VDG  +VP    +  G DA ++   A  HR  +   HV   ++  L   + D F    + 
Sbjct: 329 VDGDGSVPVESAKADGLDAVARVGVAADHRGIVCDRHVFRIIQHWLHAGEPDPFYDPLND 388

Query: 272 YIKLGVTADAIEAIYKK 222
           Y+ L  TA  IE  ++K
Sbjct: 389 YVIL-PTAFEIEKYHEK 404


>06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089
          Length = 681

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 149 RWNKRKLTLAERKNRIKQKK 90
           RW K KL+ +ERK R ++ K
Sbjct: 230 RWKKEKLSKSERKRRAREAK 249


>01_06_1261 - 35826513-35828941,35829201-35829294
          Length = 840

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 195 IPQEERVKERLGQTEALEQTQANIGREEKQNQAKEGFLHQETAGSGGSLN 46
           I    ++ ERL Q E + QT   IG   K   ++ G +HQ+      SLN
Sbjct: 377 IEDSSKLSERLKQVEEVLQTIQRIG---KSVHSENGNIHQQLTEVDDSLN 423


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,366,771
Number of Sequences: 37544
Number of extensions: 196901
Number of successful extensions: 538
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)