Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327C04f
(490 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 178 1e-44
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 177 1e-44
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 177 1e-44
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 177 1e-44
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 177 1e-44
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 177 1e-44
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 177 1e-44
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 173 2e-43
AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5 pr... 54 4e-07
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 42 0.002
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 178 bits (433), Expect = 1e-44
Identities = 83/145 (57%), Positives = 111/145 (76%)
Frame = -3
Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
TG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++
Sbjct: 155 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEE 214
Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
DED++K+QFS+YIK VT D +E +YKKAH AIR +P KRWN+ K++
Sbjct: 215 DEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKMS 272
Query: 125 LAERKNRIKQKKASFIKRLQAQAEA 51
LA++K+R+ QKKASF++ + AE+
Sbjct: 273 LAQKKDRVAQKKASFLRAQERAAES 297
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 177 bits (432), Expect = 1e-44
Identities = 83/145 (57%), Positives = 111/145 (76%)
Frame = -3
Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
TG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++
Sbjct: 3 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 62
Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
DED++K+QFS+YIK VT D +E +YKKAH AIR +P KRWN+ K++
Sbjct: 63 DEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKMS 120
Query: 125 LAERKNRIKQKKASFIKRLQAQAEA 51
LA++K+R+ QKKASF++ + AE+
Sbjct: 121 LAQKKDRVAQKKASFLRAQERAAES 145
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 177 bits (432), Expect = 1e-44
Identities = 83/145 (57%), Positives = 111/145 (76%)
Frame = -3
Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
TG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++
Sbjct: 155 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 214
Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
DED++K+QFS+YIK VT D +E +YKKAH AIR +P KRWN+ K++
Sbjct: 215 DEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKMS 272
Query: 125 LAERKNRIKQKKASFIKRLQAQAEA 51
LA++K+R+ QKKASF++ + AE+
Sbjct: 273 LAQKKDRVAQKKASFLRAQERAAES 297
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 177 bits (432), Expect = 1e-44
Identities = 83/145 (57%), Positives = 111/145 (76%)
Frame = -3
Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
TG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++
Sbjct: 155 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 214
Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
DED++K+QFS+YIK VT D +E +YKKAH AIR +P KRWN+ K++
Sbjct: 215 DEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKMS 272
Query: 125 LAERKNRIKQKKASFIKRLQAQAEA 51
LA++K+R+ QKKASF++ + AE+
Sbjct: 273 LAQKKDRVAQKKASFLRAQERAAES 297
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 177 bits (432), Expect = 1e-44
Identities = 83/145 (57%), Positives = 111/145 (76%)
Frame = -3
Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
TG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++
Sbjct: 155 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 214
Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
DED++K+QFS+YIK VT D +E +YKKAH AIR +P KRWN+ K++
Sbjct: 215 DEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKMS 272
Query: 125 LAERKNRIKQKKASFIKRLQAQAEA 51
LA++K+R+ QKKASF++ + AE+
Sbjct: 273 LAQKKDRVAQKKASFLRAQERAAES 297
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 177 bits (432), Expect = 1e-44
Identities = 83/145 (57%), Positives = 111/145 (76%)
Frame = -3
Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
TG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++
Sbjct: 155 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 214
Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
DED++K+QFS+YIK VT D +E +YKKAH AIR +P KRWN+ K++
Sbjct: 215 DEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKMS 272
Query: 125 LAERKNRIKQKKASFIKRLQAQAEA 51
LA++K+R+ QKKASF++ + AE+
Sbjct: 273 LAQKKDRVAQKKASFLRAQERAAES 297
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 177 bits (432), Expect = 1e-44
Identities = 82/145 (56%), Positives = 111/145 (76%)
Frame = -3
Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
TG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++
Sbjct: 155 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 214
Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
DED++K+QFS+YIK VT D +E +YKKAH AIR +P +RWN+ K++
Sbjct: 215 DEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKERWNRPKMS 272
Query: 125 LAERKNRIKQKKASFIKRLQAQAEA 51
LA++K+R+ QKKASF++ + AE+
Sbjct: 273 LAQKKDRVAQKKASFLRAQERAAES 297
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 173 bits (422), Expect = 2e-43
Identities = 83/145 (57%), Positives = 111/145 (76%)
Frame = -3
Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
TG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++
Sbjct: 162 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 221
Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
DED++K+QFS+YIK VT D +E +YKKAH AIR +P KRWN+ K++
Sbjct: 222 DEDAYKKQFSQYIKNSVTPD-MEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKMS 278
Query: 125 LAERKNRIKQKKASFIKRLQAQAEA 51
LA++K+R+ QKKASF++ + AE+
Sbjct: 279 LAQKKDRVAQKKASFLRAQERAAES 303
>AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5
protein.
Length = 62
Score = 53.6 bits (123), Expect = 4e-07
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = -3
Query: 242 IEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLTLAERKNRIKQKKASFIKRLQA 63
+E +YKKAH AIR +P KRWN+ K++LA++K+R+ QKKASF++ +
Sbjct: 1 MEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKMSLAQKKDRVAQKKASFLRAQER 58
Query: 62 QAEA 51
AE+
Sbjct: 59 AAES 62
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 41.5 bits (93), Expect = 0.002
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -3
Query: 485 TGARVFGAMKGAVDGGLNVPH 423
TG +VFGA+KGAVDGGL++PH
Sbjct: 105 TGNKVFGALKGAVDGGLSIPH 125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,715,662
Number of Sequences: 237096
Number of extensions: 1060605
Number of successful extensions: 2715
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2704
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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