Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327C04f
         (490 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   139   1e-33
AF125951-3|AAY86273.1|  244|Caenorhabditis elegans Hypothetical ...    28   4.2  
AF040643-12|AAB94964.2|  658|Caenorhabditis elegans Hypothetical...    27   5.5  
Z68879-4|CAA93085.1|  215|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U53154-9|AAC25850.1|  109|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical ...    27   9.7  
AC006769-12|AAF60591.1|  384|Caenorhabditis elegans Hypothetical...    27   9.7  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  139 bits (336), Expect = 1e-33
 Identities = 68/142 (47%), Positives = 91/142 (64%)
 Frame = -3

Query: 485 TGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 306
           TG+++F  MKG  DGG+NVPHS  RF G+D ESK++NAE HR  I G HVA+YM  L+++
Sbjct: 154 TGSKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEE 213

Query: 305 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLT 126
           DED +KRQFSK++  G+ AD + A Y+K H AIRAD S             KR   ++LT
Sbjct: 214 DEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADAS---PAAKKAAKPSKRHTAKRLT 270

Query: 125 LAERKNRIKQKKASFIKRLQAQ 60
             ERK R+  KKA  ++  + Q
Sbjct: 271 YDERKQRVADKKALLLQLKEQQ 292


>AF125951-3|AAY86273.1|  244|Caenorhabditis elegans Hypothetical
           protein D2063.4 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = +3

Query: 228 VDGFNSICSDS*FYVLAELSLERILIILFK--TSHVFSNMQTKDVSPVYFSIELF 386
           VDGF ++CS S   V + L ++++  +L +   +HV  ++  ++++ +   IE++
Sbjct: 53  VDGFRNVCSGSDLSVRSNLDVKQLSELLKEDPCTHVAGDVVIENLTDIAIPIEVY 107


>AF040643-12|AAB94964.2|  658|Caenorhabditis elegans Hypothetical
           protein F14D2.9 protein.
          Length = 658

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 299 DSFKRQFSKYIKLGVTADAIEAIYKKAHE 213
           D   R  S+YIK   T+D IE + KK +E
Sbjct: 408 DDLVRVSSEYIKFPTTSDEIETMTKKFYE 436


>Z68879-4|CAA93085.1|  215|Caenorhabditis elegans Hypothetical
           protein K08F4.5 protein.
          Length = 215

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 189 QEERVKERLGQTEALEQTQANIGREEKQNQAKEG 88
           +EE  K+   + EA E+ +    +EEK+ ++KEG
Sbjct: 80  KEEEKKDATKKEEAKEEKKEEERKEEKKEESKEG 113


>Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical
           protein R09D1.7 protein.
          Length = 369

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = -3

Query: 455 GAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFS 276
           G V G  N+   + +  GYD     FN+E+  A  +     E   + E +D  + K  + 
Sbjct: 269 GTVFGEANMSRKLVQQEGYDLSHPTFNSEIRAAFKYNA-TTETFLTFETNDTIAAKIDYV 327

Query: 275 KYIKLG 258
           K   LG
Sbjct: 328 KDRILG 333


>U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical
           protein R05G6.2 protein.
          Length = 339

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 356 HIFGLHVAEYMRSLEQDDEDSFKRQFSKY 270
           H+F L +++YMR  + DDE+  K + S +
Sbjct: 279 HLF-LSLSDYMRDKQFDDEEHLKTELSTF 306


>U53154-9|AAC25850.1|  109|Caenorhabditis elegans Hypothetical
           protein C33G8.4 protein.
          Length = 109

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -3

Query: 467 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFK 288
           G  + A DG L +  + K    ++A      A  +  H F   V +YM +  +DD+ ++K
Sbjct: 33  GVSEAAADGILKIAETYKG--QFEAAKGDREAGKNVFHTFHAEVDKYMETQSEDDQIAYK 90


>AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical
           protein Y49F6A.4 protein.
          Length = 514

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 356 HIFGLHVAEYMRSLEQDDEDSFKRQFSKY 270
           H+F L +++YMR  + DDE+  K + S +
Sbjct: 254 HLF-LSLSDYMRDKQFDDEEHLKTELSTF 281


>AC006769-12|AAF60591.1|  384|Caenorhabditis elegans Hypothetical
           protein Y45G12C.13 protein.
          Length = 384

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 356 HIFGLHVAEYMRSLEQDDEDSFKRQFSKY 270
           H+F L +++YMR  + DDE+  K + S +
Sbjct: 279 HLF-LSLSDYMRDKQFDDEEHLKTELSTF 306


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,727,284
Number of Sequences: 27780
Number of extensions: 176464
Number of successful extensions: 572
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)