Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327C03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021420-1|AAX33568.1|  347|Drosophila melanogaster LD03728p pro...   124   6e-29
AF044220-1|AAD02322.1|  347|Drosophila melanogaster HCG-1 protein.    124   6e-29
AF044219-1|AAD02321.1|  347|Drosophila melanogaster HCG-1 protei...   124   6e-29
AE014298-2250|AAS65354.1|  347|Drosophila melanogaster CG9038-PB...   124   6e-29
AE014298-2249|AAF48527.1|  347|Drosophila melanogaster CG9038-PA...   124   6e-29

>BT021420-1|AAX33568.1|  347|Drosophila melanogaster LD03728p
           protein.
          Length = 347

 Score =  124 bits (300), Expect = 6e-29
 Identities = 60/76 (78%), Positives = 65/76 (85%)
 Frame = +1

Query: 292 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYXNWPEADWATECVSRAEILRLI 471
           + IP DKINLRLILVSGKTKEF+FSP DSAGDIA  V+ NWPE DW  E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287

Query: 472 YQGRFLHSSVTLGALG 519
           YQGRFLH +VTLGALG
Sbjct: 288 YQGRFLHCNVTLGALG 303


>AF044220-1|AAD02322.1|  347|Drosophila melanogaster HCG-1 protein.
          Length = 347

 Score =  124 bits (300), Expect = 6e-29
 Identities = 60/76 (78%), Positives = 65/76 (85%)
 Frame = +1

Query: 292 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYXNWPEADWATECVSRAEILRLI 471
           + IP DKINLRLILVSGKTKEF+FSP DSAGDIA  V+ NWPE DW  E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287

Query: 472 YQGRFLHSSVTLGALG 519
           YQGRFLH +VTLGALG
Sbjct: 288 YQGRFLHCNVTLGALG 303


>AF044219-1|AAD02321.1|  347|Drosophila melanogaster HCG-1 protein
           protein.
          Length = 347

 Score =  124 bits (300), Expect = 6e-29
 Identities = 60/76 (78%), Positives = 65/76 (85%)
 Frame = +1

Query: 292 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYXNWPEADWATECVSRAEILRLI 471
           + IP DKINLRLILVSGKTKEF+FSP DSAGDIA  V+ NWPE DW  E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287

Query: 472 YQGRFLHSSVTLGALG 519
           YQGRFLH +VTLGALG
Sbjct: 288 YQGRFLHCNVTLGALG 303


>AE014298-2250|AAS65354.1|  347|Drosophila melanogaster CG9038-PB,
           isoform B protein.
          Length = 347

 Score =  124 bits (300), Expect = 6e-29
 Identities = 60/76 (78%), Positives = 65/76 (85%)
 Frame = +1

Query: 292 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYXNWPEADWATECVSRAEILRLI 471
           + IP DKINLRLILVSGKTKEF+FSP DSAGDIA  V+ NWPE DW  E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287

Query: 472 YQGRFLHSSVTLGALG 519
           YQGRFLH +VTLGALG
Sbjct: 288 YQGRFLHCNVTLGALG 303


>AE014298-2249|AAF48527.1|  347|Drosophila melanogaster CG9038-PA,
           isoform A protein.
          Length = 347

 Score =  124 bits (300), Expect = 6e-29
 Identities = 60/76 (78%), Positives = 65/76 (85%)
 Frame = +1

Query: 292 KNIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYXNWPEADWATECVSRAEILRLI 471
           + IP DKINLRLILVSGKTKEF+FSP DSAGDIA  V+ NWPE DW  E VS+AEILRLI
Sbjct: 229 RTIPSDKINLRLILVSGKTKEFIFSPSDSAGDIAQTVFDNWPE-DWTHETVSKAEILRLI 287

Query: 472 YQGRFLHSSVTLGALG 519
           YQGRFLH +VTLGALG
Sbjct: 288 YQGRFLHCNVTLGALG 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,657,846
Number of Sequences: 53049
Number of extensions: 492641
Number of successful extensions: 1479
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)