Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327C03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81449-7|CAE17762.1|  121|Caenorhabditis elegans Hypothetical pr...    80   1e-15
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    31   0.66 
EF090262-1|ABK78775.1|  120|Caenorhabditis elegans glycoprotein ...    30   0.87 
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    29   2.7  
AF067608-6|AAC17648.2|  194|Caenorhabditis elegans Hypothetical ...    28   3.5  
U53333-11|AAA96164.1|  104|Caenorhabditis elegans Hypothetical p...    27   8.1  

>Z81449-7|CAE17762.1|  121|Caenorhabditis elegans Hypothetical
           protein C46F11.6 protein.
          Length = 121

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = +1

Query: 283 MSAK---NIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYXNWPEADWATECVSRA 453
           MSAK   +   +++ LRLILVSGKT EF F P+ SA D+   V+  WP+ +W  + V  A
Sbjct: 1   MSAKQSIDSQAERVVLRLILVSGKTHEFEFHPLTSAHDVTQMVFDQWPD-EWYEDKVQSA 59

Query: 454 EILRLIYQGRFLHSSVTLGAL 516
           ++L+LIY GRFLH SVTL AL
Sbjct: 60  QMLKLIYHGRFLHGSVTLHAL 80


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 281 QCRQKIYPEIRSTYD*SWFPERRKSSSSVPSTRPATSHCTST 406
           Q  +  YP + ST++   +P+  +  +S PST  +T+  T+T
Sbjct: 178 QSPKPTYPSVPSTFEFEKYPKSTEEPTSTPSTSTSTTTTTTT 219


>EF090262-1|ABK78775.1|  120|Caenorhabditis elegans glycoprotein
           hormone alpha 2 protein.
          Length = 120

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 25/83 (30%), Positives = 36/83 (43%)
 Frame = +2

Query: 38  CEKLLVLMNINGKSC*LRLQTMGRLLCLCF*YIFRAVMMAK*FGRVKCLCRMLGSHGCSE 217
           C+K+ V   IN K C L +  + R    CF + F   +  K     KC CRM+      E
Sbjct: 36  CKKVGVEELINEKGCDLMIIRINRCRGHCFSFTFPNPLTKKYSVHAKC-CRMVE----WE 90

Query: 218 ILSLDKSCATRRRITEKEADTQC 286
           +L  +  C+   R     + TQC
Sbjct: 91  MLETELKCSKGNRNLRIPSATQC 113


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 338  PERRKSSSSVPSTRPATSHCTSTIIGPKLTG 430
            P+   SS+SVPS+  ATS  +ST +G    G
Sbjct: 1508 PQPTVSSTSVPSSTGATSSGSSTTVGSSTVG 1538


>AF067608-6|AAC17648.2|  194|Caenorhabditis elegans Hypothetical
           protein B0511.9a protein.
          Length = 194

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +2

Query: 380 PATSHCTSTIIGPKLTGQRNACLAP 454
           P+T  CT T I P LT  R    AP
Sbjct: 76  PSTGECTRTSIAPTLTSARTPVAAP 100


>U53333-11|AAA96164.1|  104|Caenorhabditis elegans Hypothetical
           protein F36A4.1 protein.
          Length = 104

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
 Frame = +1

Query: 223 FSG*IVCNTTSDHRKGS*YTMSAKNIPGDKINLRLILVSGKTK--EFVFSPVD 375
           F   I CN    H  G  Y +    I  DK+       S +TK  E+   P D
Sbjct: 21  FEADITCNIPGAHWCGEIYVLEKNLIKDDKLKHEKFCTSERTKSLEYTIDPTD 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,127,504
Number of Sequences: 27780
Number of extensions: 249664
Number of successful extensions: 785
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)