Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327C02f
         (457 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF336133-1|AAK15343.1| 1484|Homo sapiens CECR2 protein protein.        32   1.1  
AB051527-1|BAB21831.1| 1119|Homo sapiens KIAA1740 protein protein.     32   1.1  
X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein pro...    29   10.0 
AK126101-1|BAC86440.1|  510|Homo sapiens protein ( Homo sapiens ...    29   10.0 

>AF336133-1|AAK15343.1| 1484|Homo sapiens CECR2 protein protein.
          Length = 1484

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = +3

Query: 261 HCGDXTELQPPXPNSQCPRRSGFFAHPDPSVGNIXYNCIEGEATXXKCTAGLRFDESPVP 440
           H  D   ++PP P +Q   +SGF  H  PS G +   C          +AG R    PVP
Sbjct: 827 HVMDSRVMRPPVPPNQWTEQSGFLPHGVPSSGYMRPPC---------KSAGHRLQPPPVP 877

Query: 441 A 443
           A
Sbjct: 878 A 878


>AB051527-1|BAB21831.1| 1119|Homo sapiens KIAA1740 protein protein.
          Length = 1119

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = +3

Query: 261 HCGDXTELQPPXPNSQCPRRSGFFAHPDPSVGNIXYNCIEGEATXXKCTAGLRFDESPVP 440
           H  D   ++PP P +Q   +SGF  H  PS G +   C          +AG R    PVP
Sbjct: 462 HVMDSRVMRPPVPPNQWTEQSGFLPHGVPSSGYMRPPC---------KSAGHRLQPPPVP 512

Query: 441 A 443
           A
Sbjct: 513 A 513


>X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein protein.
          Length = 1754

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +1

Query: 220  LSGRSTNATSPSTYTAAIXLNSSPXSLTHNVPXAVDSLPIPTPLWXI 360
            +S  ST   S S Y + +   SSP SL    P     L   T LW +
Sbjct: 1588 ISNSSTFTKSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHL 1634


>AK126101-1|BAC86440.1|  510|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44113 fis, clone TESTI4046487, highly  similar
           to Mus musculus plexin A1 (Plxna1). ).
          Length = 510

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +1

Query: 220 LSGRSTNATSPSTYTAAIXLNSSPXSLTHNVPXAVDSLPIPTPLWXI 360
           +S  ST   S S Y + +   SSP SL    P     L   T LW +
Sbjct: 224 ISNSSTFTKSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHL 270


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,517,608
Number of Sequences: 237096
Number of extensions: 1120102
Number of successful extensions: 2784
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2784
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)