Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327C02f
(457 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 44 5e-05
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 44 5e-05
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 41 5e-04
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 40 6e-04
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 39 0.002
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 36 0.014
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 32 0.23
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 32 0.23
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 30 0.69
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 28 2.8
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 27 4.9
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 4.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 4.9
AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lecti... 27 4.9
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 27 6.5
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68333-4|CAA92723.2| 271|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical pr... 27 8.6
Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA hai... 27 8.6
U64601-10|AAP40523.1| 91|Caenorhabditis elegans Hypothetical p... 27 8.6
U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-lik... 27 8.6
AF099915-2|AAC68772.1| 262|Caenorhabditis elegans Hypothetical ... 27 8.6
AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone stem-... 27 8.6
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 44.0 bits (99), Expect = 5e-05
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +3
Query: 105 CPAK-DGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQPFNVHCGDXTE 281
C K DG + + F C G+A C LVF+PTI CD P +V +
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTIL---VCDWPRDV--AECAG 301
Query: 282 LQPPXPNSQCPRRSGFFAHPDPSVGNIXYNCIEGEATXXKCTAGLRFDESPV 437
L P P + G+F+ S + C G A C AGL+F ES V
Sbjct: 302 LPTPQPTCE---EDGYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTV 348
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 44.0 bits (99), Expect = 5e-05
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = +3
Query: 105 CPAK-DGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQPFNVHCGDXTE 281
C K DG + + F C G+A C LVF+PTI CD P +V +
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTIL---VCDWPRDV--AECAG 301
Query: 282 LQPPXPNSQCPRRSGFFAHPDPSVGNIXYNCIEGEATXXKCTAGLRFDESPV 437
L P P + G+F+ S + C G A C AGL+F ES V
Sbjct: 302 LPTPQPTCE---EDGYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTV 348
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 40.7 bits (91), Expect = 5e-04
Identities = 40/142 (28%), Positives = 56/142 (39%), Gaps = 15/142 (10%)
Frame = +3
Query: 24 EYLNKKVIMRVFIVLTAVAAIASAQFK---------CPAKDGQYEDDRXCDKFFECVDGV 176
+YLN + MR + A + SA K CP DG Y K+ +CV+ V
Sbjct: 7 QYLNSNLQMRQLSIFAAAVILISADAKNVLNPKGPPCPDGDGLYAVG-CSSKYLQCVNNV 65
Query: 177 ATTXLCXDGLVFDPTIRKINKCDQPFNVH-C--GDXTEL---QPPXPNSQCPRRSGFFAH 338
C +GL FD R + +C++ + H C GD L Q + R SG +A
Sbjct: 66 EYEQSCPEGLYFD---RLLARCERRSSNHLCATGDRVTLNVRQKAVSINCVGRLSGDYAL 122
Query: 339 PDPSVGNIXYNCIEGEATXXKC 404
Y C G + KC
Sbjct: 123 DKTVCNENYYQCANGISYMRKC 144
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +3
Query: 105 CPAKDGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTI 224
C +DG + F C +GV C D LVFD +
Sbjct: 353 CKNRDGIFGIKECHASFLSCDNGVGRVIQCADNLVFDTRV 392
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 84 IASAQFKCP-AKDGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQPFNV 260
IA F C DG + F+ C +G C L+F+P + +CD NV
Sbjct: 567 IALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNP---YVGECDYSTNV 623
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 81 AIASAQFKCPAK-DGQYEDDRXCDKFFECVDGVATTXLCXDGLVFD 215
A F C K +G+Y + FF C DG A C LVF+
Sbjct: 425 AEVKVDFDCTGKPNGKYIKEACTKSFFTCHDGRAFANDCPGDLVFN 470
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 40.3 bits (90), Expect = 6e-04
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Frame = +3
Query: 117 DGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQPFNV-HCGDXTELQPP 293
DG + FF C +G+A C LVF+P I+ CD P NV C + +E +P
Sbjct: 182 DGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPA---ISSCDWPKNVMDCSEKSE-KP- 236
Query: 294 XPNSQCPRRSGFFAHPDPSVGNIXYNCIEGEATXXKCTAGLRFDE 428
C G+F+ S + C G C GL F E
Sbjct: 237 ---QNCGEVDGYFSFGRCS--SSFSACTNGIPIVMFCPDGLMFSE 276
Score = 31.1 bits (67), Expect = 0.40
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Frame = +3
Query: 114 KDGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRK------INKCDQPFNVHCGDX 275
KDG Y + C G C L++DPT +K I++C Q +C
Sbjct: 123 KDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMIDECSQVSGEYC--- 179
Query: 276 TELQPPXPNSQCPRRSGFFAHPDPSVGNIXYNCIEGEATXXKCTAGLRFD 425
E S+C N+ ++C EG A C A L F+
Sbjct: 180 -ESDGNISKSEC--------------SNVFFSCSEGIAHRRNCPANLVFN 214
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 117 DGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQPFNV-HCGDXTE 281
DG Y +F CV G A C + LV+ + + CD NV CG+ E
Sbjct: 30 DGMYPLGACEPRFLACVSGEARYMDCPEDLVYH---KNLEFCDWRHNVFECGEEGE 82
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 38.7 bits (86), Expect = 0.002
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Frame = +3
Query: 105 CPAK-DGQYEDDRXCDKFFECVDG-VATTXLCXDGLVFDPTIRKINKCDQPFNVH-CGDX 275
C K DG Y ++R C +C G + C L F+ + KCD P V C +
Sbjct: 1182 CDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFN---QLTGKCDYPQKVSGCENH 1238
Query: 276 TELQPPXPNSQCPRRSGFFAHPDPSVGNIXYNCIEGEATXXKCTAGLRFD 425
+ N +C F A D + + Y C+ G C +G F+
Sbjct: 1239 GQ-----TNGECSEHGSFIA--DANNCEVFYRCVWGRKVVMTCPSGTVFN 1281
Score = 31.1 bits (67), Expect = 0.40
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +3
Query: 102 KCPAKDGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQP 251
+C D C+ F+ CV G C G VF+P ++ CD P
Sbjct: 1244 ECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPL---LSVCDWP 1290
Score = 30.3 bits (65), Expect = 0.69
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 93 AQFKCPAK-DGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINK-CDQ 248
A+F C +K DG Y ++F CV G A C D LVF+ + + CD+
Sbjct: 95 AEFDCTSKQDGIYSIG-CSNQFISCVAGGAYMAKCPDSLVFNERTQDCRESCDE 147
Score = 27.1 bits (57), Expect = 6.5
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Frame = +3
Query: 93 AQFKCPAK-DGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQPFNVHCG 269
A +CPA +G + ++ CV+GV C D VF + D+
Sbjct: 27 AATECPAYFNGNIAGNACSREYSICVNGVRQAATCSDDSVFYED--ECVPVDESPECRVD 84
Query: 270 DXTEL-QPPXPNSQC-PRRSGFFAHPDPSVGNIXYNCIEGEATXXKCTAGLRFDE 428
+ TE P C ++ G ++ N +C+ G A KC L F+E
Sbjct: 85 ENTEEDDTPYAEFDCTSKQDGIYS---IGCSNQFISCVAGGAYMAKCPDSLVFNE 136
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 35.9 bits (79), Expect = 0.014
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +3
Query: 69 TAVAAIASAQFKCPAKDGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQ 248
T + FKC KDG + C KF CV+G++ C +GL F CD+
Sbjct: 554 TRAPTTTTPAFKC-TKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTM---MCDR 609
Query: 249 PFNVHC 266
P C
Sbjct: 610 PDPSKC 615
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 31.9 bits (69), Expect = 0.23
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +3
Query: 105 CPAK-DGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQPFNV-HCG--- 269
C K DG Y +F C G++ C L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVP 117
Query: 270 -DXTELQPPXPNSQ 308
D T Q P+ +
Sbjct: 118 QDVTSTQEAYPSEE 131
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 144 CDKFFE-CVDGVATTXLCXDGLVFDPTIRKINKCDQPFNVH 263
C + ++ CV+G +C +GL F P + DQ H
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECH 577
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 31.9 bits (69), Expect = 0.23
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +3
Query: 105 CPAK-DGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQPFNV-HCG--- 269
C K DG Y +F C G++ C L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVP 117
Query: 270 -DXTELQPPXPNSQ 308
D T Q P+ +
Sbjct: 118 QDVTSTQEAYPSEE 131
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 144 CDKFFE-CVDGVATTXLCXDGLVFDPTIRKINKCDQPFNVH 263
C + ++ CV+G +C +GL F P + DQ H
Sbjct: 537 CSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECH 577
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 30.3 bits (65), Expect = 0.69
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 105 CPAK-DGQYEDDRXCDKFFECVDGVATTXLCXDGLVFDPTIRKINKCDQPFNV-HCG 269
C K DG Y +F C G++ C L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCG 114
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 232 STNATSPSTYTAAIXLNSSPXSLTHNVPXAVDSLPIPTP 348
+TN PS +++ + L +P SL N+P +P P
Sbjct: 240 ATNFPDPSQFSSTVPLPPAPSSLIQNLPPPPQPAFLPQP 278
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 166 SMESPQPXSAXTVLCSTLLSGRSTNATSPSTYTAAIXLNSSPXSLTHNVPXAVDSLPIPT 345
S +P P T + T S S + T+PST T I +++ + T + + PT
Sbjct: 125 SKYTPAPTVTSTTVVDTSESSTSQSTTTPSTTTTIIVSSTTTTNPTTSTTPTTPTTTTPT 184
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 87 ASAQFKCPAKDGQYEDDRXCDKFFECVDGVATTXLC 194
++ QF+C + + +D + CD+ F+C D + LC
Sbjct: 3188 SNGQFQCTSGEC-IDDAKVCDRNFDCTDRSDESSLC 3222
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 87 ASAQFKCPAKDGQYEDDRXCDKFFECVDGVATTXLC 194
++ QF+C + + +D + CD+ F+C D + LC
Sbjct: 3188 SNGQFQCTSGEC-IDDAKVCDRNFDCTDRSDESSLC 3222
>AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lectin
protein 43 protein.
Length = 572
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 240 CDQPFNVHC--GDXTELQPPXPNSQCPRRSGFFAHPD 344
C+ PF+V G T P PN P GF+++ D
Sbjct: 161 CEVPFHVTSTSGTPTRAPTPTPNGSVPCPEGFWSYKD 197
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 258 VHCGDXTELQPPXPNSQCPRRSGF 329
+ G T L PP P +QCPR+ G+
Sbjct: 448 IDAGKGTPLAPP-PQAQCPRQPGW 470
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 258 VHCGDXTELQPPXPNSQCPRRSGF 329
+ G T L PP P +QCPR+ G+
Sbjct: 450 IDAGKGTPLAPP-PQAQCPRQPGW 472
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
protein F28B4.3 protein.
Length = 2229
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -1
Query: 445 DAGTGDSSKRRPAVHLXSVASPSMQL*XIXPTEGSGWAKNPLRRGHCEL 299
DA DS++++ VHL S + + P GSG +P G+ ++
Sbjct: 528 DANPNDSTEKQTIVHLESYWRAPVYFIYVQPAIGSGCNTSPDSAGYRDM 576
>Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical
protein K04D7.6 protein.
Length = 360
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +3
Query: 204 LVFDPTIRKINKCDQPFNVHCGDXTELQPPXPNSQCPRRSGFFAHPDPSVGNIXY 368
+V +PT + P V E P PN P F A P P+ GN+ Y
Sbjct: 292 IVTEPTSSSSSNRPIPI-VSQSSIPESSIPIPNRIDPEHQEFVAAPVPTYGNLNY 345
>Z68333-4|CAA92723.2| 271|Caenorhabditis elegans Hypothetical
protein C05C12.4 protein.
Length = 271
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 105 CPAKDGQYEDDRXCDKFFECVDGVATTXLCXDGLVFD 215
CP K G Y C + F+CV G +C D + D
Sbjct: 51 CPCKYGYYGPS--CFEIFDCVIGELREDICSDEIEND 85
>Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical
protein K01C8.5 protein.
Length = 707
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 225 RKINKCDQPFNVHCGDXTELQPPXPNSQCPR 317
++ N C Q D E PP P+S CP+
Sbjct: 64 KRWNSCLQHVESQPEDIREWDPPPPSSHCPQ 94
>Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical
protein R06F6.1 protein.
Length = 367
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 424 SKRRPAVHLXSVASPSMQL*XIXPTEGSGWAKNPLRRGHCELGXGGW 284
SKRRP + +P +L ++ S A +P RR H E GW
Sbjct: 159 SKRRPETGKSNRKAPRGRLFTNGGSDSSSVASSPSRRDHWEEPTLGW 205
>Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA
hairpin-binding protein protein.
Length = 367
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 424 SKRRPAVHLXSVASPSMQL*XIXPTEGSGWAKNPLRRGHCELGXGGW 284
SKRRP + +P +L ++ S A +P RR H E GW
Sbjct: 159 SKRRPETGKSNRKAPRGRLFTNGGSDSSSVASSPSRRDHWEEPTLGW 205
>U64601-10|AAP40523.1| 91|Caenorhabditis elegans Hypothetical
protein M03F4.7b protein.
Length = 91
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 54 VFIVLTAVAAIASAQFKCPAKDGQYEDDRXCDKFFE 161
+F+ L A A+AS P+KDG++ + DK ++
Sbjct: 5 LFVGLLAATALASHHSSDPSKDGEHFKGKEHDKKYD 40
>U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical
protein M03F4.7a protein.
Length = 314
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 54 VFIVLTAVAAIASAQFKCPAKDGQYEDDRXCDKFFE 161
+F+ L A A+AS P+KDG++ + DK ++
Sbjct: 5 LFVGLLAATALASHHSSDPSKDGEHFKGKEHDKKYD 40
>AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-like
protein protein.
Length = 314
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 54 VFIVLTAVAAIASAQFKCPAKDGQYEDDRXCDKFFE 161
+F+ L A A+AS P+KDG++ + DK ++
Sbjct: 5 LFVGLLAATALASHHSSDPSKDGEHFKGKEHDKKYD 40
>AF099915-2|AAC68772.1| 262|Caenorhabditis elegans Hypothetical
protein E02H9.7 protein.
Length = 262
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/36 (30%), Positives = 13/36 (36%)
Frame = +2
Query: 170 WSRHNQXLPGRSCVRPYYQEDQQMRPALQRTLRRXD 277
W +Q PG C + YY D P T D
Sbjct: 131 WKSKSQGTPGSKCPKDYYNNDGLCSPVKATTTPTPD 166
>AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone
stem-loop binding proteinCDL-1 protein.
Length = 367
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 424 SKRRPAVHLXSVASPSMQL*XIXPTEGSGWAKNPLRRGHCELGXGGW 284
SKRRP + +P +L ++ S A +P RR H E GW
Sbjct: 159 SKRRPETGKSNRKAPRGRLFTNGGSDSSSVASSPSRRDHWEEPTLGW 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,980,040
Number of Sequences: 27780
Number of extensions: 166715
Number of successful extensions: 544
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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