Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS327C01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-691|AAF45995.3|  840|Drosophila melanogaster CG4041-PA ...    31   0.95 
AY089604-1|AAL90342.1|  742|Drosophila melanogaster RE19838p pro...    28   6.7  
AE013599-2611|AAF57754.1| 1205|Drosophila melanogaster CG5756-PA...    28   6.7  
AE013599-2610|AAM68174.2|  742|Drosophila melanogaster CG5756-PB...    28   6.7  
AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA ...    28   8.8  

>AE014298-691|AAF45995.3|  840|Drosophila melanogaster CG4041-PA
           protein.
          Length = 840

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 317 KLLSCVTL*YYHPTSPCKVGEVLKQQQLTKNLNELTISRFTR**AVIGLQRTCRYH 484
           K++ CV+  + H     +VG  L Q +L   L    IS+F+      G+QRTC  H
Sbjct: 771 KIVVCVSNIHQHSV---EVGHPLAQLKLLCKLKSFPISQFSHFLVACGVQRTCILH 823


>AY089604-1|AAL90342.1|  742|Drosophila melanogaster RE19838p
           protein.
          Length = 742

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 498 DFMCQW*RHVRCSPMTAYHRVNRE 427
           +F+C W R+V C     Y+ +N E
Sbjct: 115 NFVCDWYRNVNCDDSEKYYEMNEE 138


>AE013599-2611|AAF57754.1| 1205|Drosophila melanogaster CG5756-PA,
           isoform A protein.
          Length = 1205

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 498 DFMCQW*RHVRCSPMTAYHRVNRE 427
           +F+C W R+V C     Y+ +N E
Sbjct: 115 NFVCDWYRNVNCDDSEKYYEMNEE 138


>AE013599-2610|AAM68174.2|  742|Drosophila melanogaster CG5756-PB,
           isoform B protein.
          Length = 742

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 498 DFMCQW*RHVRCSPMTAYHRVNRE 427
           +F+C W R+V C     Y+ +N E
Sbjct: 115 NFVCDWYRNVNCDDSEKYYEMNEE 138


>AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA
           protein.
          Length = 1929

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 332 VTL*YYHPTSPCKVGEVLKQQQLTKNLNELTIS 430
           VT  +YHP+SP     + K+  ++K L +L +S
Sbjct: 41  VTPPHYHPSSPAVKKHLSKELMISKTLRKLPVS 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,441,451
Number of Sequences: 53049
Number of extensions: 358218
Number of successful extensions: 636
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)