Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327B09f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 141 3e-34
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 137 4e-33
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 128 4e-30
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 89 2e-18
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 85 3e-17
09_02_0347 + 7604466-7604622,7604809-7605146 29 2.3
01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313 29 2.3
07_03_0105 + 13455906-13457198 29 3.0
01_07_0346 + 42889121-42890406,42896115-42896118 29 3.0
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 28 4.0
09_06_0175 + 21350528-21351136 28 4.0
05_06_0149 - 25991761-25993181,25993246-25993324 28 4.0
03_02_0616 - 9874882-9874974,9875067-9875189,9875284-9875379,987... 28 4.0
03_06_0048 - 31274899-31277193 28 5.2
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 28 5.2
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 27 6.9
10_02_0035 - 4429737-4429781,4430769-4430890,4431000-4431297,443... 27 6.9
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 27 6.9
08_02_0028 - 11371547-11371657,11372326-11372518,11372738-113728... 27 6.9
06_02_0017 - 10649527-10651183,10651264-10652363 27 6.9
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 27 9.1
02_05_0274 - 27371048-27371203,27371750-27371779,27372018-273721... 27 9.1
02_03_0147 - 15738479-15738650,15739015-15739256 27 9.1
02_01_0305 + 2041370-2043114,2043764-2044121 27 9.1
01_06_1285 - 35995943-35996087,35996909-35997697,35997802-359978... 27 9.1
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 141 bits (342), Expect = 3e-34
Identities = 64/115 (55%), Positives = 83/115 (72%)
Frame = +1
Query: 154 TAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDE 333
T G++IWRI+NF+P+P+ GKF+ GDSYIIL+TT+ +L DIHYWIG++++QDE
Sbjct: 49 TGGLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDE 108
Query: 334 SGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSGFNHV 498
SG AAILTV LD GG AVQ+RE G+E+ FLSYF+ + GG SGF HV
Sbjct: 109 SGTAAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHV 163
Score = 51.2 bits (117), Expect = 5e-07
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Frame = +1
Query: 118 AKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYII--LRTTSDSRNNLSW 291
AK P A + T +Q+WRI + + I + D KFY GD YI + D L
Sbjct: 391 AKEEPQ-AYIDCTGSLQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECL-- 447
Query: 292 DIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEG 471
I W G++S +++ A L + + AVQ R G E F FQ+ +G
Sbjct: 448 -IGSWFGKKSIEEDRVTAISLASKMVESAKFQAVQTRLYEGKEPIQFFVIFQS-FQVFKG 505
Query: 472 GNPSGFNHVVTNAG 513
G SG+ + G
Sbjct: 506 GLSSGYKKFIAENG 519
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 137 bits (332), Expect = 4e-33
Identities = 61/117 (52%), Positives = 82/117 (70%)
Frame = +1
Query: 157 AGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDES 336
+G+++WRI+NF+P+PV GKFY GDSYIIL+TT+ + D+HYW+G++++QDE+
Sbjct: 37 SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96
Query: 337 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSGFNHVVTN 507
G AAILTV LD GG AVQ+RE G E+ LSYF+ + GG SGFNHV N
Sbjct: 97 GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVN 153
Score = 47.6 bits (108), Expect = 6e-06
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 154 TAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT-TSDSRNNLSWDIHYWIGRESTQD 330
T +Q+WR+ ++ D K Y GD YI T T D + I W G++S ++
Sbjct: 406 TGHLQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECL--IGTWFGKKSVEE 463
Query: 331 ESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSGFNHVVTNA 510
+ +A L + A Q R G E F FQ+ L +GG SG+ + +
Sbjct: 464 DRTSAISLASKMFQAAKFQAAQARLYEGKEPIQFFVIFQS-LQVFKGGLSSGYKNFIAVN 522
Query: 511 G 513
G
Sbjct: 523 G 523
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 128 bits (308), Expect = 4e-30
Identities = 56/117 (47%), Positives = 81/117 (69%)
Frame = +1
Query: 157 AGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDES 336
+G++IWRI+ + +PV ++ G+F+ GDSY+IL+TT+ + DIHYW+G++++QDE+
Sbjct: 76 SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135
Query: 337 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSGFNHVVTN 507
G AAI TV LD GG AVQ+RE G+E+ FLSYF+ + EGG SGF H N
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASGFRHTEIN 192
Score = 54.8 bits (126), Expect = 4e-08
Identities = 48/181 (26%), Positives = 74/181 (40%), Gaps = 9/181 (4%)
Frame = +1
Query: 4 FSCLLFVFLGSVWARTATK--PQEISGPITSLSDK---NARDKAKVHPAFAN----VGRT 156
F ++F S W + A E G + +L + N + AK P + T
Sbjct: 391 FETVIFRSKFSKWPKKADAVVSDESRGKVAALLKRQGFNVKGLAKAAPVKEEPQPQIDCT 450
Query: 157 AGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDES 336
+Q+WR+ E ++ + KFY GD YI + + I W G++S QDE
Sbjct: 451 GNLQVWRVNGTEKTFLSFSEQCKFYSGDCYIF-QYSYPGEEGEECLIGTWFGKKSVQDEK 509
Query: 337 GAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSGFNHVVTNAGA 516
A + + + AV R G E A F S FQ L +GG +G+ V+ G
Sbjct: 510 TTAISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQN-LVIFKGGVSTGYKKFVSENGI 568
Query: 517 Q 519
+
Sbjct: 569 E 569
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 89.0 bits (211), Expect = 2e-18
Identities = 44/80 (55%), Positives = 53/80 (66%)
Frame = +1
Query: 250 ILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESAL 429
I T S +DIH+WIG++S+QDE+G AAI TV LD GG AVQHRE G+ES
Sbjct: 54 ITTTCSKGGGAYLFDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDK 113
Query: 430 FLSYFQTPLTYLEGGNPSGF 489
FLSYF+ + LEGG SGF
Sbjct: 114 FLSYFKPCIIPLEGGFASGF 133
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/144 (25%), Positives = 65/144 (45%)
Frame = +1
Query: 82 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 261
I S +A +V P G+ ++++ + + ++++GKFY GD YI+L T
Sbjct: 376 IKGASKSSAPVDEEVPPLLEGDGK---LEVYCVNGSAKTALPKEELGKFYSGDCYIVLYT 432
Query: 262 TSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSY 441
+ + YWIG++S ++ A + + G + R G E F++
Sbjct: 433 YHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIAL 492
Query: 442 FQTPLTYLEGGNPSGFNHVVTNAG 513
FQ P+ L+GG SG+ V G
Sbjct: 493 FQ-PMVILKGGISSGYQKFVEEKG 515
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/116 (37%), Positives = 62/116 (53%)
Frame = +1
Query: 124 VHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHY 303
V AF VG G+ IW I I + + GKFY G++YIIL T ++HY
Sbjct: 4 VDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHNVHY 63
Query: 304 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEG 471
W+G E+ +++ A+ + LD G VQ+RET G ES FLSYF+ + ++G
Sbjct: 64 WVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQG 119
Score = 41.1 bits (92), Expect = 5e-04
Identities = 28/114 (24%), Positives = 50/114 (43%)
Frame = +1
Query: 163 VQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGA 342
+++W + N + ++ + Y GD YII + + + W G S ++ A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHL-FFAWSGLNSINEDRVA 460
Query: 343 AAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSGFNHVVT 504
AA L G+ D G AV + G E +F F++ L +GG + + V+
Sbjct: 461 AASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKS-LIIFKGGRSMAYKNFVS 513
>09_02_0347 + 7604466-7604622,7604809-7605146
Length = 164
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 138 CQCRQNSRCANMENTELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSG 317
CQ R N + +N + +R + H ++QR F+ +T +Q + + DRSG
Sbjct: 43 CQGRSNMFKGDCKNKNM-FESRVDDLHSHLIQRGFMKGYTCWAKHGEQELGSGAVADRSG 101
Query: 318 VD 323
D
Sbjct: 102 AD 103
>01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313
Length = 289
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 296 STTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSSTER-PWVTK 421
ST + SRR+ + P SS +AWT A R W+TK
Sbjct: 67 STYLASSSRRRRKRPPVTSSDVAWTVEDAAIGDELRRGTWMTK 109
>07_03_0105 + 13455906-13457198
Length = 430
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 407 VSRCWTAAPPNLSSRPTVRIAAA 339
V R W +A P+L+SRP +AAA
Sbjct: 37 VCRAWRSALPSLASRPLAPVAAA 59
>01_07_0346 + 42889121-42890406,42896115-42896118
Length = 429
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 266 RTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAP 388
R+ T G +TTGSV SRR+ + + A T SS P
Sbjct: 125 RSATTKTSGAATTGSVSSRRRARRAAAVARHSAATPSSAPP 165
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 245 TSFYGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 400
TS G PR AT +T GS R+T P QS+P T+ +PR++T
Sbjct: 104 TSVQGAPRAPATA----ATVPQGGSPRRTV--PAQSAPGGPATAQSSPRAAT 149
>09_06_0175 + 21350528-21351136
Length = 202
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +3
Query: 309 RSGVDARRVRSRRNPHRWPGRQVRGRRGPAPRDHGSRKCF 428
R G ARRVRS R P R P RR PRD F
Sbjct: 80 RGGGGARRVRSPRTPSRPPNSTSARRR--RPRDAAGTSLF 117
>05_06_0149 - 25991761-25993181,25993246-25993324
Length = 499
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -1
Query: 431 NKALS*PMVSRCWTAAPPNLSSRPTVRIAAAPDSSCVDSRPIQ*WISHDRLLRLSEVVRK 252
N A+S ++R AA P++ T R+ APDS V + PI+ SHD L + V+R+
Sbjct: 71 NDAVSADAMARL-AAANPSI----TFRLLPAPDSPDVGAHPIK--RSHDTLKLANPVLRE 123
Query: 251 MMYESP 234
+ P
Sbjct: 124 FLRSLP 129
>03_02_0616 -
9874882-9874974,9875067-9875189,9875284-9875379,
9875457-9875666,9875718-9875812,9876032-9876123,
9876539-9876660
Length = 276
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 141 QCRQNSRCANMENTELRTNTRCSEG-HRKILQRRFIHHFTDDLGQSQQSIMGYPLLD 308
QC S+C+ +T +R + CSE R+IL+ +H+ +L Q + ++D
Sbjct: 79 QCPLFSKCSLTIDTVIRPDNGCSENTKRQILREHNVHNQAHNLTSEQLAAREVEVVD 135
>03_06_0048 - 31274899-31277193
Length = 764
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 414 THGLSVLDRGAPELVVQANGEDCGGS*LVL-RRLPTDPV 301
T G LDR P VV NG++ G L ++LPT PV
Sbjct: 335 TVGAGTLDRDFPAHVVLGNGKNYSGVSLYSGKQLPTTPV 373
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 224 NSTKEIHTSFYGRPRTVATIYHGIST-TGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 400
NST++ YG G T T + GS S +PP S+ ++ AP+S
Sbjct: 548 NSTQDGSAPSYGAQGVAGQASPGQQTSTPAAGSHPGYSSQPPTSAASSYPVQGSAPQSGY 607
Query: 401 ERP 409
P
Sbjct: 608 GAP 610
>10_06_0002 +
9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 309 RSGVDARRVRSRRNPHRWPGRQVRGRRGPAPRDHGSRKCFVP 434
R A R+ P W GR+ G R PA R G VP
Sbjct: 70 RESAAAGEPRAGEGPGGWEGRRSGGGRAPARRRGGGETRAVP 111
>10_02_0035 -
4429737-4429781,4430769-4430890,4431000-4431297,
4431644-4431682
Length = 167
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 306 DRSGVDARR---VRSRRNPHRWPGRQVRGRR 389
DR G A R V RR+ WPGRQ RGR+
Sbjct: 57 DRQGAAAPRGSGVEQRRSG--WPGRQARGRQ 85
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -1
Query: 497 TWLKPDGFPPSK*VKGVWKYDRN 429
TW +PD PP+ W Y N
Sbjct: 474 TWCRPDEIPPTTDAPSTWTYRNN 496
>08_02_0028 -
11371547-11371657,11372326-11372518,11372738-11372814,
11373498-11373608,11374533-11374659,11374745-11375022
Length = 298
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 11 VSFLFSWDPSGHGRRPSLRR*AGRSHRCQIKTPVTKPKSIRLLPMS 148
+S F W P+ RP+ R RC ++T + +SIR+ +S
Sbjct: 240 ISSSFCWSPNSRLFRPTEERDRKIPTRCSLETEYFQLESIRIYDLS 285
>06_02_0017 - 10649527-10651183,10651264-10652363
Length = 918
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 394 QHRETMGHESALFLSYFQTPLTYLEGGNPSG 486
+H+ HE + L+ F +TY+ G NP G
Sbjct: 196 EHKREELHEVLMLLATFAVTITYVAGLNPPG 226
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 290 GISTTGSVGSRRKTSQEPPQSSPLAWTTSSGA 385
G + S G+RR S EP SP++ +SS A
Sbjct: 389 GFAEISSAGNRRSGSSEPNLKSPVSQLSSSKA 420
>02_05_0274 -
27371048-27371203,27371750-27371779,27372018-27372194,
27372598-27372677,27373464-27373505,27373632-27373788,
27374028-27374074,27375205-27375445
Length = 309
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 383 PPNLSSRPTVRIAAAP-DSSCVDSRPIQ*WISHDRLLRL 270
PP PT AAAP ++ RP+Q W H ++ L
Sbjct: 17 PPPAREPPTEPPAAAPAPAAAASDRPLQPWEQHAAVINL 55
>02_03_0147 - 15738479-15738650,15739015-15739256
Length = 137
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 294 YPLLDRSGVDARRVRSRRNPHRWPGRQVRGRRGPAPRDHGSRKCFV 431
+PLL R+ A + W G++ RGRR P PR R+C V
Sbjct: 25 FPLLVRTLAQAISSATLARRREWCGQRRRGRRSP-PRTR-RRRCAV 68
>02_01_0305 + 2041370-2043114,2043764-2044121
Length = 700
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 392 TAAPPNLSSRPTVRIAAAPDSSCVDSRP 309
TAA P+ SS T+ AAAP S+ V P
Sbjct: 62 TAAAPSSSSAATLAAAAAPSSAAVAVLP 89
>01_06_1285 -
35995943-35996087,35996909-35997697,35997802-35997871,
35997989-35998220
Length = 411
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +2
Query: 332 SQEPPQSSPLAWTTSSGAPRSSTERPWVTKVLCSYHI 442
SQE SSP W +G R T LC Y +
Sbjct: 154 SQETATSSPPGWENGTGEARQKKGAGINTSELCEYRV 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,116,344
Number of Sequences: 37544
Number of extensions: 445259
Number of successful extensions: 1639
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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