Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS327B09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 123 9e-29
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 84 7e-17
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 84 7e-17
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 31 0.38
Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical pr... 31 0.66
AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical ... 31 0.66
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 31 0.66
AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical ... 30 1.2
AF038611-7|AAB92040.1| 466|Caenorhabditis elegans Hypothetical ... 28 3.5
U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon ge... 28 4.7
AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein. 28 4.7
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 27 6.2
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 27 6.2
U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical pr... 27 6.2
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 8.1
U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astaci... 27 8.1
AJ561203-1|CAD99206.1| 279|Caenorhabditis elegans NAS-7 protein... 27 8.1
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 27 8.1
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 123 bits (296), Expect = 9e-29
Identities = 57/123 (46%), Positives = 74/123 (60%)
Frame = +1
Query: 130 PAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWI 309
PA A +G+ G+ +WRI F PV + D G FY GD+YI L D WD+H+W+
Sbjct: 8 PALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG----CWDVHFWL 63
Query: 310 GRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSGF 489
G+ ++ DE G AAI TV +DD GG QHRE +ES LFLSYF + Y+ GG SG+
Sbjct: 64 GKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGY 123
Query: 490 NHV 498
HV
Sbjct: 124 RHV 126
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 83.8 bits (198), Expect = 7e-17
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 142 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRES 321
+VG G+ +W I+NF P + + G+FY D+Y++L+TT ++ L I YW+G +
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 322 TQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNP-SGF 489
+ D+ +A+ VGL + RE M E+ FL+ F + Y+EGG SGF
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF 619
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 83.8 bits (198), Expect = 7e-17
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 142 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRES 321
+VG G+ +W I+NF P + + G+FY D+Y++L+TT ++ L I YW+G +
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 322 TQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNP-SGF 489
+ D+ +A+ VGL + RE M E+ FL+ F + Y+EGG SGF
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF 619
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.5 bits (68), Expect = 0.38
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 224 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 385
+ST + T+ P T +T STT + + TS EPP SS P+ TT++
Sbjct: 91 SSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 150
Query: 386 PRSSTERP 409
+STE P
Sbjct: 151 ETTSTEAP 158
Score = 31.5 bits (68), Expect = 0.38
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 224 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 385
+ST + T+ P T +T STT + + TS EPP SS P+ TT++
Sbjct: 137 SSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 196
Query: 386 PRSSTERP 409
+STE P
Sbjct: 197 ETTSTEPP 204
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +2
Query: 224 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 385
+ST + T+ P T +T S T + + TS EPP SS P+ TT++
Sbjct: 804 SSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 863
Query: 386 PRSSTERP 409
+STE P
Sbjct: 864 ETTSTEPP 871
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +2
Query: 224 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 385
+ST + T+ P T +T S T + + TS EPP SS P+ TT++
Sbjct: 666 SSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 725
Query: 386 PRSSTERP 409
+STE P
Sbjct: 726 ETTSTEPP 733
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = +2
Query: 224 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 385
+ST + T+ P T +T S T + + TS EPP SS P+ TT +
Sbjct: 758 SSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTITAP 817
Query: 386 PRSSTERP 409
+STE P
Sbjct: 818 ETTSTEPP 825
>Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical
protein W04G3.2 protein.
Length = 565
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 201 GYWFEVLYSPYLHTG-CSADIGKSRMDFGFVTGVFI 97
G W++V+YSP + TG CS K D G TG +
Sbjct: 402 GQWYQVIYSPPVSTGPCSMVSYKKLSDNGEATGSIV 437
>AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical
protein Y62F5A.1b protein.
Length = 297
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 254 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 397
Y R T A I I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 254 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 397
Y R T A I I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical
protein T12F5.1 protein.
Length = 249
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 49 TATKPQEISGPITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQK 213
T K QE+ GP+ D+ D AK ++ R G QNF+ I + +K
Sbjct: 171 TPEKGQEVEGPVEEFDDETNEDVAKAR-SYNPAARKLGGSSKSDQNFQKINLRKK 224
>AF038611-7|AAB92040.1| 466|Caenorhabditis elegans Hypothetical
protein E04A4.6 protein.
Length = 466
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 145 VGRTAGVQIWRIQNFEPIPVAQKDIGKFYKG 237
VG AG Q +R++ P+P A +G Y G
Sbjct: 259 VGYKAGEQTYRVKGSIPVPFAVPTLGNCYSG 289
>U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon gene
protein 1 protein.
Length = 892
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 155 VLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPRKTKRRH 9
V P KAGW + L D+ + G ++ V + P + K+RH
Sbjct: 726 VEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRH 774
>AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein.
Length = 885
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 155 VLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPRKTKRRH 9
V P KAGW + L D+ + G ++ V + P + K+RH
Sbjct: 719 VEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRH 767
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 57 GRRPCPDGSQENKK 16
GRR CPDGS E+K+
Sbjct: 161 GRRNCPDGSDEHKE 174
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3
Query: 57 GRRPCPDGSQENKK 16
GRR CPDGS E+K+
Sbjct: 161 GRRNCPDGSDEHKE 174
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.5 bits (58), Expect = 6.2
Identities = 28/102 (27%), Positives = 39/102 (38%)
Frame = +2
Query: 95 QIKTPVTKPKSIRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEIHTSFYGRPRTV 274
Q TP T+P + PM V + RTS P T S +S
Sbjct: 318 QTTTPSTEPSTTITTPMEQSSTVSSVQKTRTSEDKPSSSTTVPTSASTSESSTSSPMAET 377
Query: 275 ATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 400
++ S+T S S TS P+SS + T ++G ST
Sbjct: 378 SS-----SSTTSQSSPASTS-TVPESSTVGSTPTTGLTTLST 413
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 172 WRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIH 300
W + NFE + + + K YK + + I++ RN L+ +IH
Sbjct: 332 WDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIH 374
>U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical
protein C06G3.4 protein.
Length = 723
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 232 KGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKF 378
K + + R S++ +NL W +WI RE ++ S A+ + D ++
Sbjct: 348 KWKRFYLNRFASEAISNLHWRYSFWIDRECDKN-SLCTAVREINFDQRW 395
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 269 TVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 400
T T STTGS+ S +Q+ +S + T S+ AP+SST
Sbjct: 797 TTGTTSGAASTTGSITS----TQQATSTSSVITTGSTSAPQSST 836
>U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astacin
protease protein 7 protein.
Length = 382
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 121 KVHPAFANVGRTAGVQIWRIQN 186
KV F+ VGRT+GVQ+ + N
Sbjct: 140 KVDGCFSEVGRTSGVQVLSLDN 161
>AJ561203-1|CAD99206.1| 279|Caenorhabditis elegans NAS-7 protein
protein.
Length = 279
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 121 KVHPAFANVGRTAGVQIWRIQN 186
KV F+ VGRT+GVQ+ + N
Sbjct: 80 KVDGCFSEVGRTSGVQVLSLDN 101
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 57 GRRPCPDGSQENKKET 10
GRR CPDG E++ ET
Sbjct: 212 GRRDCPDGEDEHQCET 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,364,680
Number of Sequences: 27780
Number of extensions: 336199
Number of successful extensions: 1086
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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